Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1712 ATGTTAATTCTTGTATCTGAAAATATATATTTTTTCTTTCTTCCTATTGTGCTGTTTGGCAGAGAAATTGACCTGCCATCGGTTTACATGGGAGACAAGGCGAACTATGAAAATTTGAGCATGAGCTCTAAACCGAGCAGTGCAGCCATCACTGGGGATAAAACGTACAAGAAACTACTGGTTGCATCGCGCACTAAAGGTTTTGCAAAGAAAAATTATGAGCACCTTGTTTCGTTGACCCATGGTGACTTCGGAAGCAGTTCTGTGGGTCGTGCCACATTTTTTTTACTTAAACTTGCTGCGTTAGAGATTGTGAGGAGGTTCTCCAAGACTAGATTTCCATGTGTATGGCAAGGTCTGCAAGCTTTACAAATCCTTGTCTATCCACCATTTAGATGGATTCAGAGATGGGCACCCTTCATGGGTTTGGTCAAAAGTATGCAGGTACTATCACGGCCATTACTAGTCCTTTCGGTTGCAACAGCTTTTACTGATCAACATTCAGAATGTAGTGATGGAAGGTCAGATGGTATTCCTAATTCTCATGACTCAGAAGTATCTGCAGAACTGTCTCTTGTGCAGGCTAATTCCAATACAGGCAACACTGAGAGAACTCCCGAAGTTTCAGAATATGAAAACTGGTTGACTCAACTGAATCAAGAGCTGGAAAATCAAGGGATCATTTTGCCAGAAAGAATCAATGATGATGAGCTCCACAGATTTTACATAGCATCTAATAATGACTTTTCATGCTTCCTCGACTCAATCAAGAAGACAATACGCTGGCGGGATAGTTACAGAATTTTTTCAGGAGAGGAGCTGGACTTGTGGTCAAATATGGTTTTCTGGCATGGGTGCGATGTGATGCACAGACCTTGCCTCATTGTTAGGCTTGGGCTAGCTTGTAGTTCATTGGCATCTAAGGATAGACCTCGATTTGCTCAGGCAATCATATCACAGGTAGAATATGGAGTCTTAAACCTTGTTGATGCTGACAACCCTCAAATTACAGTATTGGTGGATTGTGAAAGATTATCCCCATTGAAAATTCCCACGAAAGTAATGAGGTCTTGTTCTTCCCTTCTACAAGATCACTTTCCTAATCGTCTTGGTTGTTTGTTTGTCATACGACTTCCCGCAGTTGTTCGTGTTATTGCCCAGACTTTTATTAAGGTTTTAAAGCCAACCACTCGGAAAAAGTTGAAAATACATGGAGAGATATATCAGAAGGTTCTTCATGACAACCTGCCGACACTACCATCATATCTTGGAGGCAACTGCACTTGCATGAAATGTTCAAAAAGTAGGACTAGCAGGATTAATAATGGGGCAGATAACAGTGACAATGAGGCTTCTCCATCACTGCATCCATCTGATGAATTAGATCACCATCAAAACAGCAACTATGACCAGTTGTTGAGATCCGCTATCGTAAGTATTATTGTATTTTGGGTTTTCGTAGCTGTTGGTGCTGGCATATACCATCCCGGTAATCTTCGTTTACCCTCATAA 1512 0.4127 MLILVSENIYFFFLPIVLFGREIDLPSVYMGDKANYENLSMSSKPSSAAITGDKTYKKLLVASRTKGFAKKNYEHLVSLTHGDFGSSSVGRATFFLLKLAALEIVRRFSKTRFPCVWQGLQALQILVYPPFRWIQRWAPFMGLVKSMQVLSRPLLVLSVATAFTDQHSECSDGRSDGIPNSHDSEVSAELSLVQANSNTGNTERTPEVSEYENWLTQLNQELENQGIILPERINDDELHRFYIASNNDFSCFLDSIKKTIRWRDSYRIFSGEELDLWSNMVFWHGCDVMHRPCLIVRLGLACSSLASKDRPRFAQAIISQVEYGVLNLVDADNPQITVLVDCERLSPLKIPTKVMRSCSSLLQDHFPNRLGCLFVIRLPAVVRVIAQTFIKVLKPTTRKKLKIHGEIYQKVLHDNLPTLPSYLGGNCTCMKCSKSRTSRINNGADNSDNEASPSLHPSDELDHHQNSNYDQLLRSAIVSIIVFWVFVAVGAGIYHPGNLRLPS* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1712 503 Pfam CRAL/TRIO domain 279 425 IPR001251 -
Lan8g1712 503 MobiDBLite consensus disorder prediction 440 461 - -
Lan8g1712 503 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 283 431 IPR001251 -
Lan8g1712 503 SMART sec14_4 275 428 IPR001251 -
Lan8g1712 503 Gene3D - 208 469 IPR036865 -
Lan8g1712 503 MobiDBLite consensus disorder prediction 440 454 - -
Lan8g1712 503 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 40 498 - -
Lan8g1712 503 CDD SEC14 272 426 IPR001251 -
Lan8g1712 503 SUPERFAMILY CRAL/TRIO domain 278 430 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1712 Lan-Chr8 23949767 23955402 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1712 - - lang:109355367 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0248 7 1557901 1563281 Lan8g1712 8 23949767 23955402 LSH
Lan6g1971 6 30628316 30632868 Lan8g1712 8 23949767 23955402 PCT
Lan8g1712 8 23949767 23955402 Lan6g1971 6 30628316 30632868 PCT