Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1971 ATGGGAAACACGGTGGATTGTTCTAAGTTGAGCAATAGCTCTAAACCAGGCAGTTTTATGACTGAGAACAAAGCATACAAGAAACTTCTAATTCCATCTCAGCCTAAATGTTTCACACTGATAAATTATGGCGGCTTTGGAAGTAGTTCTGTGGGTTCTATCACTATTTTTTTACTTAAAGTTGCTGCCTTAGAGATGTTTAGGAGGTTCTCCAAAAGCAGATGTCCATATGTTTGGCGAGTCCTTCAGGCATTACAGATGCTTTGTTATCCACCTCTCGAATGGATTCCGTGGTGGGAACCCTTCAAGGGTTTGGTTAAAAGCATGCAGGTCCTATCAAGACCATTACTAGTCATTTCAATCGCAACGAGTTTTTCTGATAAATCAGAATGTAGCAATGGAACGTTAGATTGTAGTACTGATTCACATGATTCTGTAGCATACTCGGAACAATCTAAAGTGGAGAATGATATGAATACAAGTCAGTGTTCGACAGATCCTAAAGTTTTAGAATCTGAAAACTGGTTGATGAAACTCCGCCAAGAGCTTGAAAATCAGGGGATTAGTTTACCAGAAAGAATCAACGATGATGAGCTACACAGATTTTGTGCAGCTTCTAATAATGATTTTTCATGCTTCCTTGCCTCAATCAAGAAGACCATAAACTGGCGAAACACTTACGGGATTCTTTCAGAAGAAGAGCTGATAATGTGGTCAGAAATGATCTTCTGGCATGGGTCTGATGTGATGCATAGACCCTGTCTTGTTGTAAGGCTTGGGCTAGCTTGCAATACATTGACATCCCAAGATAGGCCTGGATTTGCTCAGGCAGTCATCTCACAGGTAGAATATGGAGTGCTGCAGTTGGTTGATGCAGACAACCCTCAAATTACTGTGTTGGTGGATTGCGAAGGATTGTCTCCATTGAGAATTCCAATGCAAATGATGAAATATTGTTCTTCCCTTTTGCAAGATCATTTTCCTAATTGCCTTGGTTGTTTGTTTGTCATACGACTTCCAGAAGTTGTTGATGCTATTGCCCAGACTTTTATTGAGGTTTTGGAGCCAGCTACAAGGAACAAGTTGAAAATAGAAGGCCATATGTATCAGAAGGTTCTTTCTGACTATCTGTTAACACTGCCATCATATCTCGGTGGCTCCTGCACTTGCATGAAATGCTCTGAATTTGGCAATTGGGAAATGCTGCAACCTCATGCAATTGGAACCAGCAGGAGATATGATGAAAGTGATGTTAGTGATGATGAAGATTCTTCATCATTGCATCTTTCCAATGAATTAAGGTTCAGCTTATATGGTAGTTTTGAACAGGTGATAAGAAATGTTATCACAGGTTTTCTCATATTTTGGGCTTTCATTGCTCTTTGTGCTTTAGTACATGATTCTGGTGGTCTTTATTCGCCCTCATAA 1428 0.3999 MGNTVDCSKLSNSSKPGSFMTENKAYKKLLIPSQPKCFTLINYGGFGSSSVGSITIFLLKVAALEMFRRFSKSRCPYVWRVLQALQMLCYPPLEWIPWWEPFKGLVKSMQVLSRPLLVISIATSFSDKSECSNGTLDCSTDSHDSVAYSEQSKVENDMNTSQCSTDPKVLESENWLMKLRQELENQGISLPERINDDELHRFCAASNNDFSCFLASIKKTINWRNTYGILSEEELIMWSEMIFWHGSDVMHRPCLVVRLGLACNTLTSQDRPGFAQAVISQVEYGVLQLVDADNPQITVLVDCEGLSPLRIPMQMMKYCSSLLQDHFPNCLGCLFVIRLPEVVDAIAQTFIEVLEPATRNKLKIEGHMYQKVLSDYLLTLPSYLGGSCTCMKCSEFGNWEMLQPHAIGTSRRYDESDVSDDEDSSSLHLSNELRFSLYGSFEQVIRNVITGFLIFWAFIALCALVHDSGGLYSPS* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1971 475 SMART sec14_4 236 389 IPR001251 -
Lan6g1971 475 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 10 468 - -
Lan6g1971 475 Gene3D - 170 427 IPR036865 -
Lan6g1971 475 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 232 392 IPR001251 -
Lan6g1971 475 SUPERFAMILY CRAL/TRIO domain 236 391 IPR036865 -
Lan6g1971 475 Pfam CRAL/TRIO domain 241 386 IPR001251 -
Lan6g1971 475 CDD SEC14 232 386 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1971 Lan-Chr6 30628316 30632868 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1971 - - gmx:100786215 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1971 6 30628316 30632868 Lan7g0248 7 1557901 1563281 PCT
Lan6g1971 6 30628316 30632868 Lan8g1712 8 23949767 23955402 PCT
Lan7g0248 7 1557901 1563281 Lan6g1971 6 30628316 30632868 PCT
Lan8g1712 8 23949767 23955402 Lan6g1971 6 30628316 30632868 PCT