Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0248 ATGGGAGACACGGTGGACTATGGTAACCTGAGCATGAGCTCTAAACCAAGCAGTGCTGCCATCTCCGGTACAAACACGTACAAGAAACTACTGGTTGCATCACGCCCTAAAGGTTTTGCTAAGAAAAATTATGAACAACTTGTTTCGTTGACCCATGGTGACTTTGGCAGCAGTGTTGTTGGTCGTGCCACATTTTTTATACTTGAAGTTGCTACATTAGAGATTGTAAGGAGGTGCTCCAAGACTAGATTTCCATTTGTATGGAGAGGTTTACAAGGTTTACAGATCCTTGTCTATCCACCATTTAAATGGATTCAGAGATGGGCACCCTTCAAGGGTTTGGTCAAAAGTATGCAGGTACTATCACGGCCATTACTAGTCCTTTCGATTGCAACAGCTTTTGCTGATCAACATTCGCAATGTAGTGATGAAACGTCAGATGGTATTCCTGATTCCCATGATTCAGAACTATCTGCGGAACTGTCTCCTGTGCAAGCTAATTCTAATACAGGATTTTGCAGCAACTCTGAGAGAGCTTCTGAAGTTTCAGAATATGAGAACTGGTTGACTCAACTCAATCAGGAGCTGGAAAATCAAGGGATCATTTTGCCAGAAAGAATCAATGATGAAGAGCTCCACAGATTTTACACAGCTTCTAATAATGACTTTTCATGCTTTCTCACCTCAATCATGAAGACAATACGCTGGCGGGAGAGTTACAGAATTTTTTCAGGAGAGGAGCTGGAATTGTGGTCAAATATGGTGTTCTGGCATGGCTTTGATGTGATGCACAGACCTTGCCTCATTGTAAGGCTTGGGCTAGCTTGTAGCTCATTGGCATCTAAAGATAGATCTCTATTTGCTCAGGCAATAATATCACAGGTAGAATACGGAGTCTTAAACTTGGTTGATGCTGACAACCCTGAAATTACAGTGTTGGTGGATTGTGAAAGGTTATCTCCATTGAAAATTCCCATGAAAATGATGAGGTCTTGTTCTTCCCTTCTGCAAGATCACTTTCCTAATCGTCTTGGTTGTTTATTTGTCATACGACTTCCGGCATTTGTTCGTGTAATTGCTCAAACTTTTATTCAGGTTTTAAAGCCGGCGACTAGGAAAAAGTTGAAAATACACGGAGATATGTATCATAAGGTTCTTCATGACAATCTACCGACACTACCATCATATCTTGGAGGCAGCTGCACTTGCATGAAATGTTCTAAAATTGGCAAGTGGGATATGCTGCAACCTCATGCAAGTGGGACTAGCAGGATTAATAGTGGGGCAGATATCAGTGACAATGAGGCTTCTACATCACTGCATCCATCTGATCAATTAGATCGCCACCAAAACAGCAACCATGACCAGTTGCTGAGATCCGCTATAGTAAGTATTATCGTGTTTTGGGTTTTCATAGCTGTTGGTGCTGGAATATATGATCCTGGTAGTCTACGTTTGCCATCGTAA 1467 0.4179 MGDTVDYGNLSMSSKPSSAAISGTNTYKKLLVASRPKGFAKKNYEQLVSLTHGDFGSSVVGRATFFILEVATLEIVRRCSKTRFPFVWRGLQGLQILVYPPFKWIQRWAPFKGLVKSMQVLSRPLLVLSIATAFADQHSQCSDETSDGIPDSHDSELSAELSPVQANSNTGFCSNSERASEVSEYENWLTQLNQELENQGIILPERINDEELHRFYTASNNDFSCFLTSIMKTIRWRESYRIFSGEELELWSNMVFWHGFDVMHRPCLIVRLGLACSSLASKDRSLFAQAIISQVEYGVLNLVDADNPEITVLVDCERLSPLKIPMKMMRSCSSLLQDHFPNRLGCLFVIRLPAFVRVIAQTFIQVLKPATRKKLKIHGDMYHKVLHDNLPTLPSYLGGSCTCMKCSKIGKWDMLQPHASGTSRINSGADISDNEASTSLHPSDQLDRHQNSNHDQLLRSAIVSIIVFWVFIAVGAGIYDPGSLRLPS* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0248 488 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 12 483 - -
Lan7g0248 488 SMART sec14_4 249 402 IPR001251 -
Lan7g0248 488 Pfam CRAL/TRIO domain 253 399 IPR001251 -
Lan7g0248 488 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 257 405 IPR001251 -
Lan7g0248 488 CDD SEC14 246 399 IPR001251 -
Lan7g0248 488 Gene3D - 178 451 IPR036865 -
Lan7g0248 488 MobiDBLite consensus disorder prediction 426 451 - -
Lan7g0248 488 MobiDBLite consensus disorder prediction 426 446 - -
Lan7g0248 488 SUPERFAMILY CRAL/TRIO domain 250 404 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0248 Lan-Chr7 1557901 1563281 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0248 - - lang:109355367 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0248 7 1557901 1563281 Lan7g0248 7 1557901 1563281 ECH
Lan7g0248 7 1557901 1563281 Lan8g1712 8 23949767 23955402 LSH
Lan6g1971 6 30628316 30632868 Lan7g0248 7 1557901 1563281 PCT
Lan7g0248 7 1557901 1563281 Lan6g1971 6 30628316 30632868 PCT