Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1711 ATGGCAGCCAATTCTTCTAATGGAGATAACGCAGCATCAAAGCAACCTCCTTTGCCATCTCCTTTGCGTTTTTCCAAATTCTTCCAGTCCAACATGAGAATCTTAGTTACTGGAGGAGCTGGATTTATTGGTTCTCACCTAGTCGATAGATTGATGGAAAATGAAAAAAATGAGGTCATTGTTGCTGACAACTACTTCACCGGGTCGAAGGACAACCTCAAAAAATGGATCGGACATCCAAGATTTGAGCTTATCCGTCATGATGTCACTGAGCCTTTGTGGATTGAGGTTGATCAGATCTACCATCTTGCATGCCCTGCTTCTCCCATTTTCTACAAATATAATCCTGTGAAGACAATAAAGACAAATGTGATTGGCACACTGAACATGCTTGGGCTTGCGAAGCGTGTTGGAGCAAGGATTTTACTTACATCAACTTCAGAGGTATATGGTGATCCTCTTGTGCATCCACAACCTGAAAGCTATTGGGGCAATGTTAACCCTATTGGAGTTCGTAGCTGCTATGATGAAGGGAAACGTGTGGCTGAGACATTGATGTTCGATTACCATAGGCAGCATGGACTAGAAATTCGCATTGCGAGAATATTCAACACATATGGACCACGCATGAATATTGATGATGGCCGTGTTGTCAGCAACTTCATTGCTCAAGCACTTCGCGGTGAATCCTTGACAGTCCAATCTCCGGGAACACAAACTCGTAGTTTCTGCTATGTCTCTGACCTGGTTGATGGCCTTATCCTTCTCATGGGAGGTTCAGACACTGGGCCAATCAACCTCGGAAACCCGGGTGAATTTACAATGCTTGAACTCGCTGAGAATGTGAAGGAGCTTATTAATCCAGATATAGAGATAAAGATAGTGGAGAACACTCCTGATGATCCAAGACAGAGAAAACCAGACATAACAAAAGCAAAGGAATTGCTTGGTTGGGAACCACAGGTTAAGTTGCGTGATGGCCTTCCACTTATGGAACAAGATTTCCGTTTAAGGCTTGGAGTTCACAAAAAGTTTTAA 1038 0.4326 MAANSSNGDNAASKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLWIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGESLTVQSPGTQTRSFCYVSDLVDGLILLMGGSDTGPINLGNPGEFTMLELAENVKELINPDIEIKIVENTPDDPRQRKPDITKAKELLGWEPQVKLRDGLPLMEQDFRLRLGVHKKF* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1711 345 Gene3D - 31 338 - -
Lan8g1711 345 CDD UGD_SDR_e 32 336 - -
Lan8g1711 345 Pfam GDP-mannose 4,6 dehydratase 35 329 IPR016040 -
Lan8g1711 345 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 344 - -
Lan8g1711 345 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 344 IPR044516 GO:0042732|GO:0048040|GO:0070403
Lan8g1711 345 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 27 336 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1711 Lan-Chr8 23944126 23948446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1711 29 344 Miscellaneous Gene Families AT1G02000 24.217 4.67e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1711 K08678 - gmx:100790835 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0250 7 1581706 1586374 Lan8g1711 8 23944126 23948446 LSH
Lan6g1970 6 30622183 30626856 Lan8g1711 8 23944126 23948446 PCT