Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0250 ATGGCATCCAATTCTTCTAATGGAGATCACGCATCATCAAAGCAACCTCCTTTGCCATCTCCTTTGCGTTTTTCCAAATTCTTCCAGTCCAACATGAGAATCTTGGTTACTGGGGGAGCTGGATTCATTGGTTCTCACCTAGTCGACAGGTTGATGGAAAATGAAAAAAATGAGGTCATTGTTGCTGACAACTACTTCACTGGGTCAAAGGACAACCTCAAAAAATGGATCGGTCATCCAAGATTTGAGCTTATCCGTCATGATGTCACTGAGCCTTTGTTGATTGAGGTTGATCAAATCTACCATCTTGCATGCCCCGCTTCCCCTATTTTCTACAAATATAATCCCGTGAAGACCATAAAGACAAATGTGATTGGCACACTGAACATGCTTGGGCTTGCTAAGCGAGTTGGAGCAAGGATTTTGCTTACATCAACTTCAGAGGTATATGGGGACCCTCTTGTCCATCCCCAACCTGAAAGCTATTGGGGCAATGTTAACCCGATTGGTGTTCGTAGCTGCTATGATGAAGGGAAACGTGTGGCTGAGACTTTGATGTTTGATTATCATAGGCAGCACGGATTAGAAATTCGCATTGCGAGAATCTTCAACACATATGGACCGCGCATGAATATTGATGATGGTCGTGTTGTCAGCAACTTCATTGCTCAAGCACTTCGTGGTGAATCCTTGACGGTGCAATCTCCTGGAACACAAACTCGCAGTTTCTGCTATGTCTCCGACCTGGTTGATGGCCTTATCCGTCTAATGGGTGGCTCAGACACTGGACCAATCAATCTTGGAAACCCAGGTGAATTTACAATGCTTGAACTTGCTGAGACTGTGAAGGAGCTTATTAACCCAGATGTTGAGATAAAGATAGTGGAGAACACTCCTGATGATCCACGACAGAGAAAACCAGACATAACTAAAGCAAAGGCATTGCTTGACTGGGAACCACAGGTCAAGTTGCGTGATGGGCTTCCTCTCATGGAAGAGGATTTCCGTTTGAGGCTTGGGGTTGACAAAAAGAATTAA 1038 0.4451 MASNSSNGDHASSKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGESLTVQSPGTQTRSFCYVSDLVDGLIRLMGGSDTGPINLGNPGEFTMLELAETVKELINPDVEIKIVENTPDDPRQRKPDITKAKALLDWEPQVKLRDGLPLMEEDFRLRLGVDKKN* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0250 345 CDD UGD_SDR_e 32 336 - -
Lan7g0250 345 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 27 336 IPR036291 -
Lan7g0250 345 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 345 IPR044516 GO:0042732|GO:0048040|GO:0070403
Lan7g0250 345 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 345 - -
Lan7g0250 345 Pfam GDP-mannose 4,6 dehydratase 35 329 IPR016040 -
Lan7g0250 345 Gene3D - 31 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0250 Lan-Chr7 1581706 1586374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0250 29 344 Miscellaneous Gene Families AT1G02000 24.217 2.04e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0250 K08678 - gmx:100818771 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0250 7 1581706 1586374 Lan7g0250 7 1581706 1586374 ECH
Lan7g0250 7 1581706 1586374 Lan8g1711 8 23944126 23948446 LSH
Lan6g1970 6 30622183 30626856 Lan7g0250 7 1581706 1586374 PCT