Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1647 ATGACATCTCTATCTCTTGTCAAAATCTCTTTCGCTCTTTCATTGTTCTTCTTCGTTTTACCTTCATCGTCTTCTTCAAGACTATCTTTTACAACAATCAAAAACCATCAACAATCTCTAACAACTTCCTATCCCCAATCACAAGCAGAAAGACTCATAAGAAGCTTTAACCTGTTCCCAGAAGATCTGGTTAACATGATAGACAATGAACCTGGTTTTACCCCTGGAACTCTTGTGGAGAAGAATTTTTCATTTCTAGCTGCTTCTGGGCCTTCTGTTGAAGACCTAGGTCACCATGCTGGCTATTATTCGTTACCTCACACCAAAGCCGCAAGGATGTTCTACTTTTTCTTTGAATCTCGGACTAGCAAAGACGACCCAATTGTTATATGGTTAACTGGAGGACCAGGTTGTAGCAGTGCAATAGCAATGTTCTATGAAAATGGCCCTTTTAAACTTGCAAATAACACATCTCTTGTGTGGAATGATTATGGTTGGGACAAGGCTTCAAATATTTTGTTTATAGACCAACCCACAGGAACAGGTTTCAGCTATTCAAGTGATATAGATGACATTCGACATAATGAAACGGGTGTTAGCAATGATTTGTATGATTTCTTGCAGGCATTTTTCAAGAAGCATCCTCAATTCAGTAAGAATGACTTTTATATTACTGGAGAATCATATGCTGGACACTACATTCCAGCTCTTGCATCAAGAGTACACAAAGGAAATAATGCTAAAGAAGGAATTCCCATAAATCTCAAGGGTTTTGCAATTGGTAATGGATTAACTAATCCTGGAATTCAGTACCCAGCGTTCACTGACTATGCAGTAGATAAAGGATTAATTACAAAGGAAGATCAAAATAGGATCAACATGCTTATCCCAGATTGTGAGCAGGCCACAAAATCTTGTCAAACTAATGGTGAGGATAGTTGTTTACAAGCATATAAAGCATGCCTGACCATATTCGAGGATATCTTGTCCATTACTGGTAACATTAATTATTATGATGTTAGAAAGCAATGTGAAGGATCATTATGTTATGACTTCTCAAATGCGGTGAGCTTTTTGAACGATGAGACAGTGAAGGCTGCTTTAGGTGTGAAGAACTTGAAGTTTGTTTCATGCAGTGAGACAGTGTACAGTGCTATGCTTAATGATTGGATGAAAAACTTAGAAGTTGATATTCCTACTCTTCTTGAGGATGGGATAAAGATGCTTGTGTATGCTGGTGAAGAAGATCTTATATGCAATTGGCTTGGTAATTCAAGGTGGGTTCATGCTATGGAGTGGTCAGGTCAAAAGGGGTTTGAGTCAGCTACTACAGTCAAATTTGTAGTTGATGGTGCTGCAGCTGGAGATTTGACAAGCCATGGACCTCTAACTTTCTTGAAGGTTTATAAAGCTGGGCACGTGGTCCCAATGGATCAACCAAAAGCTGCACTTCAAATGCTGAAAAATTGGATGGGAGGCAAACTTGCTGCTTAG 1494 0.3896 MTSLSLVKISFALSLFFFVLPSSSSSRLSFTTIKNHQQSLTTSYPQSQAERLIRSFNLFPEDLVNMIDNEPGFTPGTLVEKNFSFLAASGPSVEDLGHHAGYYSLPHTKAARMFYFFFESRTSKDDPIVIWLTGGPGCSSAIAMFYENGPFKLANNTSLVWNDYGWDKASNILFIDQPTGTGFSYSSDIDDIRHNETGVSNDLYDFLQAFFKKHPQFSKNDFYITGESYAGHYIPALASRVHKGNNAKEGIPINLKGFAIGNGLTNPGIQYPAFTDYAVDKGLITKEDQNRINMLIPDCEQATKSCQTNGEDSCLQAYKACLTIFEDILSITGNINYYDVRKQCEGSLCYDFSNAVSFLNDETVKAALGVKNLKFVSCSETVYSAMLNDWMKNLEVDIPTLLEDGIKMLVYAGEEDLICNWLGNSRWVHAMEWSGQKGFESATTVKFVVDGAAAGDLTSHGPLTFLKVYKAGHVVPMDQPKAALQMLKNWMGGKLAA* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1647 497 ProSitePatterns Serine carboxypeptidases, serine active site. 224 231 IPR018202 GO:0004185
Lan8g1647 497 SUPERFAMILY alpha/beta-Hydrolases 97 494 IPR029058 -
Lan8g1647 497 Gene3D alpha/beta hydrolase 80 496 IPR029058 -
Lan8g1647 497 Pfam Serine carboxypeptidase 95 492 IPR001563 GO:0004185|GO:0006508
Lan8g1647 497 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 37 493 IPR001563 GO:0004185|GO:0006508
Lan8g1647 497 PANTHER SERINE CARBOXYPEPTIDASE 3 37 493 - -
Lan8g1647 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 174 IPR001563 GO:0004185|GO:0006508
Lan8g1647 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 185 IPR001563 GO:0004185|GO:0006508
Lan8g1647 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 210 235 IPR001563 GO:0004185|GO:0006508
Lan8g1647 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 463 476 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1647 Lan-Chr8 23433883 23437671 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1647 K16298 - qsu:112023425 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1647 8 23433883 23437671 Lan13g0399 13 2732795 2735929 LSH
Lan6g1922 6 30169074 30172757 Lan8g1647 8 23433883 23437671 PCT