Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1922 ATGGTATCATTATCATTATCTAGTATTCTCAAAATGTGTGTGTCTTTTCTTATGTTGTTTTCTCTAATATTTGTTTCAACTTCCATGTCTGCTCCTAGTTATTCCACTAACAATGACCTTCATTTTTCTTCAACTGCTTCTCTTCCTAAACTACAAGCAGAAAAACTCATTAGAGGGCTTAATCTATTCCCAAAATATAGCATTAATACACCACTCAGTGACCCTTATTTTGTTCCTGGAAAGATTGTGGAGAAGAAGTTTAGTTTCCTTAACTTTGATGATTCTTTAGGACCTTCTGTTCAAGAATTTGGTCACCATGCAGGATATTATCCACTTCCTCAATCAAAGGCTGCAAGGATGTTCTACTTTTTCTTTGAATCTAGGAACAGTAAAGATGACCCTGTTGTTATTTGGTTGACCGGAGGACCAGGTTGTAGTAGTGAACTTGCTTTGTTTTATGAGAATGGTCCTTTTCAATTTTCCAAGAACTTGTCTCTTGTATGGAATGATTATGGTTGGGACAAGGCATCAAATATATTATTTGTAGACCAACCTACTGGTACAGGTTTCAGCTATACTTCCGATGATAACGATATTCGTCATGATGAAGAGGGTGTTAGTAATGATTTGTACGATTTCTTACAGGCATTTTTCAAGGAGCACCCTCAGTTTCTCAAGAATGATTTCTTTATTACTGGAGAATCATATGCCGGACATTACATTCCAGCTCTTGCATCCAGGGTACACCAAGGAAACAAAGCAAAACAAGGAGTTCATATAAATCTCAAGGGTTTTGCTATTGGTAATGGCTTAACCAATCCTGAAATCCAATACCAAGCATATACAGATTATGCATTAGACAGAGGAATAATAAGAAAAGCTGATTATAACAGTATCAACAAGTTGCTTCCAGCATGTCAAAAAGCCATAAAAACTTGTGGCACTGAAGGTGGAGATACATGTGTATCTTCCATGTATGTTTGCAATGACATATTCAACCAGATCATGTCCATTGCTGGTAACATTAATTACTATGACATTAGAAAGAAATGTGAGGGAGATTTGTGTTATGACTTCTCCAATGTGGAGAAATTCTTAAACAAGAAGACAGTGAGGGATGCATTAGGTGTTGGGGACTTGGACTTTGTTTCATGCAGTAGCACAGTATATGATGCCATGATGCAAGATTGGATGAGAAATCTAGAAGTGGGTATTCCAGCTCTTCTCGAGGACGGAATCAAGGTGCTTGTCTACGCCGGAGAAGAAGATCTCATATGCAATTGGCTCGGGAATTCAAGGTGGGTTCATGCTATGGAGTGGTCGGGTCGAAAAGAGTTCGGGGCATCTCCAACAGTCCCATTTTTAGTTGATGGTGCAGAAGCAGGAGAGCTGAAAAGCCATGGACCTCTAACTTTCCTCAAGGTAAATGAGGCTGGACACATGGTCCCTATGGACCAACCAAAAGCTGCACTTCAGATGCTAAGAAGTTGGACACAAGGGAAGTTGGCTATGACAAGGAGTGGAGATAATGTCTCTCCTAATTGA 1545 0.3922 MVSLSLSSILKMCVSFLMLFSLIFVSTSMSAPSYSTNNDLHFSSTASLPKLQAEKLIRGLNLFPKYSINTPLSDPYFVPGKIVEKKFSFLNFDDSLGPSVQEFGHHAGYYPLPQSKAARMFYFFFESRNSKDDPVVIWLTGGPGCSSELALFYENGPFQFSKNLSLVWNDYGWDKASNILFVDQPTGTGFSYTSDDNDIRHDEEGVSNDLYDFLQAFFKEHPQFLKNDFFITGESYAGHYIPALASRVHQGNKAKQGVHINLKGFAIGNGLTNPEIQYQAYTDYALDRGIIRKADYNSINKLLPACQKAIKTCGTEGGDTCVSSMYVCNDIFNQIMSIAGNINYYDIRKKCEGDLCYDFSNVEKFLNKKTVRDALGVGDLDFVSCSSTVYDAMMQDWMRNLEVGIPALLEDGIKVLVYAGEEDLICNWLGNSRWVHAMEWSGRKEFGASPTVPFLVDGAEAGELKSHGPLTFLKVNEAGHMVPMDQPKAALQMLRSWTQGKLAMTRSGDNVSPN* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1922 514 Pfam Serine carboxypeptidase 101 499 IPR001563 GO:0004185|GO:0006508
Lan6g1922 514 Gene3D alpha/beta hydrolase 88 511 IPR029058 -
Lan6g1922 514 PANTHER SERINE CARBOXYPEPTIDASE 3 40 503 - -
Lan6g1922 514 ProSitePatterns Serine carboxypeptidases, serine active site. 231 238 IPR018202 GO:0004185
Lan6g1922 514 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 181 IPR001563 GO:0004185|GO:0006508
Lan6g1922 514 PRINTS Carboxypeptidase C serine protease (S10) family signature 182 192 IPR001563 GO:0004185|GO:0006508
Lan6g1922 514 PRINTS Carboxypeptidase C serine protease (S10) family signature 217 242 IPR001563 GO:0004185|GO:0006508
Lan6g1922 514 PRINTS Carboxypeptidase C serine protease (S10) family signature 470 483 IPR001563 GO:0004185|GO:0006508
Lan6g1922 514 SUPERFAMILY alpha/beta-Hydrolases 102 501 IPR029058 -
Lan6g1922 514 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 503 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1922 Lan-Chr6 30169074 30172757 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1922 K16298 - gmx:100785987 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1922 6 30169074 30172757 Lan8g1647 8 23433883 23437671 PCT
Lan6g1922 6 30169074 30172757 Lan13g0399 13 2732795 2735929 PCT
Lan8g1645 8 23421329 23424366 Lan6g1922 6 30169074 30172757 PCT