Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0399 ATGACATTCTTATTATCTCTCATCAAAATATATTTGTCTATTCCATTGTTCTTCTTTATTTTACCTTCATTCTCCTCATCGAGTCCAACTTTTCCAAAACCCAAACACCTTCTCCAATCTTATTTCCCAAAATCACAAGCTGAAAGTCTCATAAGAAGCTTTAACCTTTCTCCCAAATATCCTGTTAACATAATAACAAGTGACAATGCTTTTGTCCCAGGAAGTATTGTGGAGAACAAAATATCATTTGTTGGTGTTTCTGGACCTTCTGTTCAAGACCTTGGTCACCATGCAGGATATTACTCACTTATTCATTCAAAAGCTGCAAGGATGTTCTACTTTTTCTTTGAATCCCAGAATAGAAAAGATGACCCAGTTGTTATATGGTTGACTGGAGGACCAGGTTGTAGCAGTTCTTTAGCATTATTCTATGAGAATGGTCCATTTAAAATTGCTAAAAACTTGTCCCTCGTATTGAATCCCTATGGCTGGGACAAGGCTTCAAATATTCTATTTGTAGACCAACCCACTGGTACAGGTTTCAGCTACTCTAATGATGAAGATGATATTCGATATGATGGAGCAAGTGCTAGTAATGATTTGTATGATTTCTTACAGGCTTTTTTCAATAAGCATCCTGAATTTGTTAAGAATGATTTCTATATTACTGGAGAATCATATGCTGGACATTATATTCCGGGTCTTGCATCTCGGGTTCACAAAGGAAATATAAAAAAAGAAGGGATTTATATAAATCTCAAGGGTCTAGCTATTGGTAATGGGTTAACCAATCCCGCAATTCAGTATCCAGCATATAGTGACTTTGCACTACAGAGAGGATTGATTACAAAGGAAGATCGAGATAGTCTCAATGAGCTTATCCCTGATTGTGAGAAATACATAAAATTATGTCAAACTAAAGTTGGGGACAGTTGCGCTTCTGCATATGAAAAATGCACCGGCATATTCCATGACCTCTTGTCCATTATTGGCAATAACATTAATTACTATGATATCAGAAAGAAATGTGACGGAAATTTGTGCTATGACTTCTCAAATCTTGAAAATTTGTTTAACAATGAGAAAGTGAAGGATGCTCTAGGTGTGAAAGACTTGAATTTTGTTTCATGTAGTATCAAAGTGTACTATGCTATGCTTGATGATTGGATGAAAAATTTAGAAGTTGATATTCCTTCTCTTCTTGAGGATGGGATAAAATTGCTTGTGTATGCTGGTGAAGAAGATCTTATATGCAATTGGCTTGGCAATTATAGATGGGTTCGTGCTATGAAGTGGTCAGGCCAAAAGAAATTTATATCAGCACCAACAGTCAAATTTATAGTTGATGGTGTTGCAGCTGGAGCTTTAACAAACAATGGACCGCTTTCATTCCTCAAGGTGTATCAAGCTGGGCACATGGTTCCTATGGATCAACCAAAAGCTTCACTCGAAATGTTAAAAAGGTGGTTGGGAGGGAAACTTTCTGTCTCTAAGAAATGA 1500 0.3647 MTFLLSLIKIYLSIPLFFFILPSFSSSSPTFPKPKHLLQSYFPKSQAESLIRSFNLSPKYPVNIITSDNAFVPGSIVENKISFVGVSGPSVQDLGHHAGYYSLIHSKAARMFYFFFESQNRKDDPVVIWLTGGPGCSSSLALFYENGPFKIAKNLSLVLNPYGWDKASNILFVDQPTGTGFSYSNDEDDIRYDGASASNDLYDFLQAFFNKHPEFVKNDFYITGESYAGHYIPGLASRVHKGNIKKEGIYINLKGLAIGNGLTNPAIQYPAYSDFALQRGLITKEDRDSLNELIPDCEKYIKLCQTKVGDSCASAYEKCTGIFHDLLSIIGNNINYYDIRKKCDGNLCYDFSNLENLFNNEKVKDALGVKDLNFVSCSIKVYYAMLDDWMKNLEVDIPSLLEDGIKLLVYAGEEDLICNWLGNYRWVRAMKWSGQKKFISAPTVKFIVDGVAAGALTNNGPLSFLKVYQAGHMVPMDQPKASLEMLKRWLGGKLSVSKK* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0399 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 172 IPR001563 GO:0004185|GO:0006508
Lan13g0399 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 183 IPR001563 GO:0004185|GO:0006508
Lan13g0399 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 208 233 IPR001563 GO:0004185|GO:0006508
Lan13g0399 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 462 475 IPR001563 GO:0004185|GO:0006508
Lan13g0399 499 SUPERFAMILY alpha/beta-Hydrolases 94 493 IPR029058 -
Lan13g0399 499 PANTHER SERINE CARBOXYPEPTIDASE 3 35 493 - -
Lan13g0399 499 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 493 IPR001563 GO:0004185|GO:0006508
Lan13g0399 499 Pfam Serine carboxypeptidase 93 491 IPR001563 GO:0004185|GO:0006508
Lan13g0399 499 Gene3D alpha/beta hydrolase 79 498 IPR029058 -
Lan13g0399 499 ProSitePatterns Serine carboxypeptidases, histidine active site. 462 479 IPR033124 GO:0004185
Lan13g0399 499 ProSitePatterns Serine carboxypeptidases, serine active site. 222 229 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0399 Lan-Chr13 2732795 2735929 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0399 K16298 - gmx:100798795 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1647 8 23433883 23437671 Lan13g0399 13 2732795 2735929 LSH
Lan6g1922 6 30169074 30172757 Lan13g0399 13 2732795 2735929 PCT