Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1021 ATGGGAGCGAGTCGAAAGCTTCAAGGTGAAATCGATCGTGTTCTCAAGAAGGTTCAAGAAGGTGTTGAAGTCTTTGATAGCATCTGGAACAAGGTTTACGATACTGATAATGTTAATCAGAAGGAGAAATTTGAAGCTGACCTAAAGAAGGAGATTAAGAAGCTTCAGAGGTACAGAGACCAGATTAAGACTTGGATTCAGTCCAGTGAGATTAAGGATAAGAAGATTAGTGCCTCTTATGAGCAAGCTCTGGTGGATGCACGCAAGCTTATTGAGAAGGAAATGGAAAGATTTAAGGTCTGTGAGAAGGAAATGAAGACCAAAGCATTCTCCAAAGAAGGTTTGGGTCAACAGCCTAAAACTGACCCTAAAGAGAAGGCTAAATCAGAGACAAGGGATTGGTTGAACAATGTGGTTGGTGAATTAGAATCTCAGATCGATAACTTCGAAGCTGAGCTTGAAGGGCTTTCTGTTAAGAAAGGAAAAAGCAGGCCCCCTAGATTGACACATCTGGAGACATCAATTACTCGGCACAAGGCTCATATAAAGCAATGTGAATTAATCTTGAGGCTACTAGATAATGATGAATTAAGTCCTGAGGAGGTTAATGATGTGAAAGATTTCCTGGATGATTACATAGAGCGCAATCAGGATGACTTCGAAGAATTCAGTGACATCGAAGAGCTATACAGTTCTTTACCTTTAGACAAGGTGGAGTCACTTGAAGATCTAGTTACAATTCCCCCCGGTCTTGCTAAGCTGGCACCTGTGCTTAGCTTGAAGCCTTCTTTGGCAGCATCAGCACCACCATCAGCATCGGCATCACAAACATCTGAGCAAGCTGAAGATACAGCTTCTCAGGATAGCAATTCTGGCATTGTTGCAATAAATCCACCTTATAAAAATAGTCTAGTTAGTCCTGCTACTTCAATACCAGCTGGAAATCTTGCAGCTCCGATTTCTATAAATGTTCCAGCGCATAATGTTGCATCAGTCATGCCTGGTTCCAATTCTGTTCAGGATGTCGTGGAGATTACTAATGTTACCAATTCATCTTCTGTAAGTCAGACTACTGCAATGAATCAAGAAGAGATTAATAGCTTCCCTGGCCGGGGACCATCTTCATTGCTTTCTGATGCTTCACCTGTAAGGAGCATCAACAGAAACAACCTATCCAATCAAACAACAGCTAATGTCCCTCTTGCTTCTGGCAACATGCTGTCCAACAACGGAGCCCTTGGTTCAGTCCCTTCAGCCTCTGAAATAACCAAGCGAAACATATTGGGAGTTGATGATAGACTTGGGAGCAATAGGATGGTGCAGCCTCTAGCATCCCCCACAAGTAATAGAACGGTCATGCCTCAGGTTGCTAAGGGTAATGATGGAACTGCCTCAATTGACTCTAGTAATGTTAATGAAGCTGCAGTCATATCTGGGAGAGTTTTCTCCCCTTCTGCGGTTCCTGGCATGCAGTGGAGACCTGGAAGCCCCTTGCAGAATCAGAATGATGTGCTTCGTGGAAGAACTGAAATAACTCCTGATCAAAAGGAAAAATATTTGCAAAAGCTTCAGCAAGTGCAGCAACAAGGGCACAGTAGCCTTCTTAATATGCATTCTCTTGCTGGAGGGAATCATAAGCAGTTTTCTGCTCAGCAACAGAATTCTCTCTTGCAGCAGTTTAATTCTCAAGCCTCATCTGTTTCTTCTCAATCTGGTCTGGGACTGGGGGTTCATTCACCTGGTTTCCATGGTATTTCATCTAGCTCATTACAGCTGCCACCCAATTCACCCCATTCTTCATCCAGCCAACAGCCATTGATTTCAGTTGCTTCTAAAGACGCAGATGCTGGCAATTCTAGGATGGAAGAACTGCAGCAACAGCAGATTTTTCTTGATGACGCTGGAACTGAATCTTCTGCTGCGATTGGCAAGAATTTCGTGAATGAAGATGATTTGAAATCCCCATATGCTGTAGATTCTCCTTTGGTGCTTATGCTGCAGTCAGGAGTATCTGCCTCTCTTCCAGAGCCTGGTCAGACTTCTAGAGAAATTGATTTGTCTCCTGGCCAACCCTTACAATCCAATCAACGTACTGGTAGCCTTGGTGTTATTGGAAGAAATTTTCCCGACCTTGGACTTGGAGCCATTGGTGATAACTTTAGTGGATCACCTGCAAATTCCGGTGGAATGCATGATCAATTATATAATTTGCAGATGCTTGAGGCAGCTACATCAAATTCCAAATTTCCACAACCTAAGGACTCAGAACGTCCTAAGGCATATACTCCTAGGTATCCAACCATAACACCTGCTAGTTATCCTCAAGTACAGGCACCTATTGTCAACAATCCTGGCTTTTGGGAGAGAGTCGGTCTTGAACCATTTGGCACTGATACCCTTTTCTTTTCATTTTATTATCAACAGAACACTTATCAACAATATTTGGCTGCGAAAGAGCTGAAGAAGCAGTCTTGGAGATATCACCGAAAGTATAACACATGGTTTCAACGGCATGAAGAGCCAAAAGTTGCAACAGATGAATATGAGCAGGGAACATATGTGTACTTCGATTTCCATATTGCTAATGATGATATGCAACATGGATGGTGTCAAAGAATCAAGACTGAGTTCACTTTTGAGTATAACTTTCTGGAAGATGAGCTTTTTGTCTAG 2673 0.4269 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNVNQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKISASYEQALVDARKLIEKEMERFKVCEKEMKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDNFEAELEGLSVKKGKSRPPRLTHLETSITRHKAHIKQCELILRLLDNDELSPEEVNDVKDFLDDYIERNQDDFEEFSDIEELYSSLPLDKVESLEDLVTIPPGLAKLAPVLSLKPSLAASAPPSASASQTSEQAEDTASQDSNSGIVAINPPYKNSLVSPATSIPAGNLAAPISINVPAHNVASVMPGSNSVQDVVEITNVTNSSSVSQTTAMNQEEINSFPGRGPSSLLSDASPVRSINRNNLSNQTTANVPLASGNMLSNNGALGSVPSASEITKRNILGVDDRLGSNRMVQPLASPTSNRTVMPQVAKGNDGTASIDSSNVNEAAVISGRVFSPSAVPGMQWRPGSPLQNQNDVLRGRTEITPDQKEKYLQKLQQVQQQGHSSLLNMHSLAGGNHKQFSAQQQNSLLQQFNSQASSVSSQSGLGLGVHSPGFHGISSSSLQLPPNSPHSSSSQQPLISVASKDADAGNSRMEELQQQQIFLDDAGTESSAAIGKNFVNEDDLKSPYAVDSPLVLMLQSGVSASLPEPGQTSREIDLSPGQPLQSNQRTGSLGVIGRNFPDLGLGAIGDNFSGSPANSGGMHDQLYNLQMLEAATSNSKFPQPKDSERPKAYTPRYPTITPASYPQVQAPIVNNPGFWERVGLEPFGTDTLFFSFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDMQHGWCQRIKTEFTFEYNFLEDELFV* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1021 890 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Lan8g1021 890 PANTHER BNAA10G16600D PROTEIN 1 890 - -
Lan8g1021 890 Coils Coil 41 61 - -
Lan8g1021 890 MobiDBLite consensus disorder prediction 266 294 - -
Lan8g1021 890 MobiDBLite consensus disorder prediction 582 609 - -
Lan8g1021 890 MobiDBLite consensus disorder prediction 578 622 - -
Lan8g1021 890 Pfam NOT2 / NOT3 / NOT5 family 746 884 IPR007282 GO:0006355
Lan8g1021 890 PIRSF NOT_su_3_5 1 890 IPR012270 GO:0006355|GO:0030015
Lan8g1021 890 Gene3D - 728 885 IPR038635 -
Lan8g1021 890 MobiDBLite consensus disorder prediction 110 131 - -
Lan8g1021 890 MobiDBLite consensus disorder prediction 673 694 - -
Lan8g1021 890 MobiDBLite consensus disorder prediction 265 294 - -
Lan8g1021 890 Coils Coil 132 159 - -
Lan8g1021 890 PANTHER CCR4 NOT-RELATED 1 890 IPR040168 GO:0030015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1021 Lan-Chr8 12167980 12177123 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1021 K12580 - gmx:100780204 1304.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0232 5 2851630 2861621 Lan8g1021 8 12167980 12177123 LSH
Lan10g0728 10 8774887 8787234 Lan8g1021 8 12167980 12177123 PCT
Lan5g0232 5 2851630 2861621 Lan8g1021 8 12167980 12177123 PCT
Lan8g1021 8 12167980 12177123 Lan10g0728 10 8774887 8787234 PCT
Lan8g1021 8 12167980 12177123 Lan5g0232 5 2851630 2861621 PCT