Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0728 ATGGGTGCGAGTCGAAAGCTCCAGGGAGAGATCGATCGCGTTCTCAAGAAGGTCCAAGAAGGCGTTGAAGTTTTCGACAGTATCTGGAACAAGGTTTACGATACTGACAATGCTAATCAGAAGGAGAAGTTTGAAGCAGATCTCAAAAAGGAGATTAAGAAGCTTCAGAGATACAGAGACCAGATTAAGACTTGGATTCAGTCCAGTGAAATCAAGGACAAGAAGGTCAGTGCCTCTTACGAGCAGGATTTGGTGGATGCACGCAAGTTAATTGAGCGTGAAATGGAAAGATTTAAGATCTGTGAGAAGGAGACTAAGACCAAAGCATTCTCTAAAGAAGGCTTGGGTCAACAACCCAAGACGGACCCGAAAGAGAAAGCAAAATCAGAAACAAGAGATTGGTTGAATAATGTGGTTGGAGAGTTAGAATCTCAGATTGATAGCTTTGAAGCTGAGCTTGAGGGGCTTTACGTCAAAAAAGGAAAGAATAGGCCACCCAGATTGACGCATCTTGAGACATCAATCACTCGGCACAAGGCTCATATAAAGAAATGTGAATTTATCTTGAGGCTACTAGATAATGATGAATTAAGTCCTGAGGAGGTTAATGACGTCAAAGATTTCTTGGATGATTATGTAGAGCGTAATCAGGATGACTTCGATGATTTCACTGATGTTGATGAACTATACAGTTCATTACCTCTAGACAGGGTGGAGACTCTTGAAGATCTTGTCACAATTCCCCCTGGTATTGTTAAGCAGGTAACACCTGGTCTTCTGTCTAAGAATACTGTGGCAACATCAGCATCAGCATCCGCATCACAAACATCTGAGCAAGCTGATGACACAGCATCACAGGATAGCAACTCAGACATTGTTCCAAGAACTCCACCTTCTAAGAATAGTGGAATTAGTTCTCCTGCTTCAACACCTACTGGGAACCATGCTACTCCTGTTTCTGTGAATGTTTATGCTCATAACTTGTCCAGTGCACCAGCTGTTGCATCAGTCTTACCTGGTTCAAACTCTGTTCGGAACCCCTTGGAGAATACTAATGCTGCCAATTCTTCATCTTCTATAAATCAGTCTACCTCTGTCAAAGAAGAGATTAATAGCTTCCCTGTCCGAAGACCATCTCCATCACTTTCTGATGCAGCACTTGGGAAGGACACTGTCAGAAACAACCTATCAAATCAAGTAACAGCTAGTATCCCCCTTGGTTCTGGTAATATGGTTTCCAGCAATGGGCCCCTTGGTTCGGTCCCTTCAGCCTCTGAAATAACCAAGAGAAACATGCTGGGAGCTAATGATAGAATTGGAAGTAGTGGGATAGTGCAACCTCTTGGATCCCCCCTAAGTAATAATAGATATATCCTACCTCAGGCTGTGAGGGCTAATGATGGCACTGCCTCAGCTGACTCTATTACTGTTAATGAAGCTCCAGCTGTGTCTGCGACAGGGAGAATTTTCTCCTCTCCTGTGGTTCCTGGTATTCAGTGGAGACCTGGAAGCCCTTTCCCGAATCAGAATGAAGTGGGGCAGCTTCGTGCCAGAACTGAAATAGCCCCAGATCAAAGGGAAAAGTTTTTGCAGAAGTTTCAGCAGGTGCAGCAGCAAGGGCACAGTACCCTTCTTAATATGCCCTCTCTCATTGGTGGAAATCAAAAGCAGTTTCCTGCCCAGCAGCACAATCCCCTTCTACAGCAGTTTAACTCTCAAGGATCGTCTGTTTCTTCTGAATCTGCTATGGGACTCGTAGTCCAATCACCAGGTCTTAGTGGTATTTCTTCTGCTTCGTTACAGCAGCCACCCAATTCTGTTCATTCCCCTTCTAGTCAACAGCCATTGATATCAGGTGTTTCCAAAGATGCAGATGTTGGCAATTCTAAGGTTGAAGAACAGCAGCAACATCAGAATTTTCCCGATGAGTCAGCTACTGAATCTACTGTTGCTACTGAGATTGGCAAAAACCTCATGAATGAAGATGATTTGAAATCAGCATATGCTGTAGATTCTCCTGCAGGAGTATCTGCCTCTCTTACTGAGCCTCATCAAACTTCCAGAGATGTTGATTTGGGTCCTGGTCAACCTTTACAATCCAATCAACCTACAGGTAACCTTGGTGTCATTGGAAGAAGAAATGGTGCTGATCTAGGAGCCATTGGCGATAACTTTAGTGGATCAAGTGTAAATTCTGGTGGAGTTCGTGAACAATTATATAATTTGGAAATGCTTGAGGCGGCTTACCACAGACTTCCGCTGCCAAAAGACTCAGAACGTCCTAGGACATATACTCCTAGGCACCCAACGATAACACCACCCAGTTATCCTCAAGTACAGGCACCTGTTGTTAATAATCCTGCCTTTTGGGAAAGAGTAGGTCTTGAACCATTTGGCACCGATACCCTATTCTTTGCGTTTTATTATCAACAGAACACATACCAACAGTATTTGGCTGCAAAGGAGCTAAAGAAGCAGTCATGGAGATACCACAGAAAGTATAACACATGGTTTCAGCGCCATGAAGAGCCCAAAGTTGCCACAGATGAATATGAGCAAGGAACATATGTGTACTTTGATTTCCATATTGCAAATGATGACCTGCAACATGGGTGGTGTCAAAGAATCAAGACTGAATTCACTTTTGAGTATAATTATCTTGAAGATGAGCTTTTTGCTTAG 2682 0.4344 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQDLVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDSFEAELEGLYVKKGKNRPPRLTHLETSITRHKAHIKKCEFILRLLDNDELSPEEVNDVKDFLDDYVERNQDDFDDFTDVDELYSSLPLDRVETLEDLVTIPPGIVKQVTPGLLSKNTVATSASASASQTSEQADDTASQDSNSDIVPRTPPSKNSGISSPASTPTGNHATPVSVNVYAHNLSSAPAVASVLPGSNSVRNPLENTNAANSSSSINQSTSVKEEINSFPVRRPSPSLSDAALGKDTVRNNLSNQVTASIPLGSGNMVSSNGPLGSVPSASEITKRNMLGANDRIGSSGIVQPLGSPLSNNRYILPQAVRANDGTASADSITVNEAPAVSATGRIFSSPVVPGIQWRPGSPFPNQNEVGQLRARTEIAPDQREKFLQKFQQVQQQGHSTLLNMPSLIGGNQKQFPAQQHNPLLQQFNSQGSSVSSESAMGLVVQSPGLSGISSASLQQPPNSVHSPSSQQPLISGVSKDADVGNSKVEEQQQHQNFPDESATESTVATEIGKNLMNEDDLKSAYAVDSPAGVSASLTEPHQTSRDVDLGPGQPLQSNQPTGNLGVIGRRNGADLGAIGDNFSGSSVNSGGVREQLYNLEMLEAAYHRLPLPKDSERPRTYTPRHPTITPPSYPQVQAPVVNNPAFWERVGLEPFGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELFA* 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0728 893 MobiDBLite consensus disorder prediction 678 708 - -
Lan10g0728 893 PANTHER CCR4 NOT-RELATED 1 891 IPR040168 GO:0030015
Lan10g0728 893 MobiDBLite consensus disorder prediction 755 778 - -
Lan10g0728 893 MobiDBLite consensus disorder prediction 110 132 - -
Lan10g0728 893 MobiDBLite consensus disorder prediction 345 383 - -
Lan10g0728 893 Coils Coil 41 61 - -
Lan10g0728 893 MobiDBLite consensus disorder prediction 594 619 - -
Lan10g0728 893 Gene3D - 733 888 IPR038635 -
Lan10g0728 893 MobiDBLite consensus disorder prediction 345 370 - -
Lan10g0728 893 Pfam NOT2 / NOT3 / NOT5 family 749 887 IPR007282 GO:0006355
Lan10g0728 893 Coils Coil 139 159 - -
Lan10g0728 893 MobiDBLite consensus disorder prediction 594 650 - -
Lan10g0728 893 MobiDBLite consensus disorder prediction 269 318 - -
Lan10g0728 893 MobiDBLite consensus disorder prediction 405 424 - -
Lan10g0728 893 MobiDBLite consensus disorder prediction 118 132 - -
Lan10g0728 893 MobiDBLite consensus disorder prediction 675 711 - -
Lan10g0728 893 PANTHER BNAA10G16600D PROTEIN 1 891 - -
Lan10g0728 893 PIRSF NOT_su_3_5 1 893 IPR012270 GO:0006355|GO:0030015
Lan10g0728 893 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Lan10g0728 893 MobiDBLite consensus disorder prediction 631 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0728 Lan-Chr10 8774887 8787234 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0728 K12580 - gmx:100785965 1426.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0728 10 8774887 8787234 Lan5g0232 5 2851630 2861621 LSH
Lan10g0728 10 8774887 8787234 Lan5g0232 5 2851630 2861621 PCT
Lan10g0728 10 8774887 8787234 Lan8g1021 8 12167980 12177123 PCT
Lan5g0232 5 2851630 2861621 Lan10g0728 10 8774887 8787234 PCT
Lan8g1021 8 12167980 12177123 Lan10g0728 10 8774887 8787234 PCT