Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0407 ATGGAAACCATGTATTTAAATTCTGGGATCTCAACTATAGTACCTTCCATTTCCACGGCCGCGTCTTTAGATACACGCGCCGCCGCCAATCCTTCTCGCGTCAGTGCGATTAGTCGGTCGGCGCCGGCGGATAAACCGAGGCAGAAGTCGGTGTTCTCCAGTTTCTCCTTTAAATACCCTCTGGAATCTCTCTGGCCTCGAACCCGGGAAACCGGGAATAGCCGGTACAGTGGGTTAGCCCTCGACGACGCCGTATTGGAAGAAAACGCTGAAGCTGGAAACGACGTCGTTGAGGAGGGGCGGAATGGGAATTGGGTATTGAAGATTTTGCGTGTGAATTCTGTGTGTAAAGGGGAAGAAGGGAAGAACAGTGTTGTTGAAGAAGAGAAGGATAATGAAAGCAATGAATATGAAGAGAACGCGTTTGAGTGTGATGGTTGTAAAGTTAATGATGATGATGATGAAAAAGAAGAAGAAAATGTTGAATTTGATAGAGACTCGTTTTCGAGAATGTTAAAAAGGGTGTCTTTGGCAGAAGCTAGATTATATGCTCAAATGTCACACTTGGGGAACTTGGCATATTCTATACCAAATATCAATCCGGCGAAACTCTTGAAACATTATGGTCTGCGTTTAGTAACTTCATCAATCGAGAAGAAGGAATTGACAGCAGCAACAGTTGAAAACAATCCTCAAGAAGTAGAGACTAATGTAAAGGAAGAGGATGATGAAGAAAGAAAGGAGCAGAAAGATAATGGATACAGGATAAGTGCATCTGCTGCTTATCATATTGCTGCTTCTGCTGCCTCTTATCTCCATGCCCAAACAAGGAGAGTACTACCATTCAAATCTTCAAATGCTTTGGCTGGTGAAGGTTCACTCGAAGGAAACAGCCAAAGCCTTGATATTAACACAGAGATGGCTTCTCTGATGGCAACTACTGATTCAGTGACAGCTGTGGTTGCAGCAAAGGAGGAAGTAAAGCAGGCTGTTGCAGATGATCTAAGCTCAACACGCTCGTCACCCTGTGAATGGTTTGTCTGTGATGATGACCAGAGTGGTACAAGATATTTTGTTATTCAGGGTTCTGAGACATTGGCGTCCTGGCAAGCAAACCTCCTTTTTGAGCCGATTCAATTTGAGGGGTTGGATGTCCTTGTGCACAGAGGTATATATGAGGCTGCTAAAGGGATGTATCTACAGATGCTGCCAGAAGTTCATGCTCACGTAAAAGCTCACGGTTCTCGTGCAACTTTACGTTTCAGCGGGCATTCTCTTGGGGGAAGCTTGGCATTACTTGTAAATCTTATGCTCTTGATAAGGCAAGAAGTGCCAATCTCCTCTCTCCTTCCTGTAATAACCTTTGGTTCCCCATCCATCATGTGTGGGGGTGATAGTCTGCTAAATGAGCTCGGATTGCCAAGGAGCCATGTACAGGCTATCACAATGCACAGAGATATCGTACCACGAGCATTTTCTTGCAACTACCCTAATCATGTTGCCGAACTCCTTAAGGCCGTTAATCGGAATTTCCGTAATCATCCTTGTCTTGATAGCCAAAAACTACTATTTGCACCAATGGGTGAACTGCTGATTCTACAACCAGAGAATAAATTTTCACCAAGCCATCCTCTCTTGCCTTCAGGCAGTGGTCTATATATTTTGACTTGTCCCTTGTCAGAATCTGTTAACACAGACAAACCGCTCAGGGCTGCTCAGTTAGTCTTCATGAACTCACCTCATCCACTTGAGATGCTAAGTGACCGATCTGCATATGGATCTGGAGGAACTATACAAAGAGATCATGACATGAATTCCTACTTAAAAACTGTGAGGTCCGTGATTCGCGAAGAACTTAACCAGATCCGTAAAGCAAGGAGAGAGCAACGGTGCAAGGTATGGTGGCCTCTTGTGTTACCAAGTGGAATTGATGGCAGCATTGTTGTTGGGAGGTCCATGGTTTCAGTGAATCTGGGTCATAACAAGTACCCTTTCTCTGGCATGATAAAAACAGGGAGAGAGTCCTTGAAAAGGTTCAGCAGACTTGTTGCTTCCCAACATATGCACTTGTTTGTGCTGCTCTTGTTCCCTGCACGGTTGTTATTCTTAGGGACATATAACATGACTAACTTTAGATGA 2139 0.4441 METMYLNSGISTIVPSISTAASLDTRAAANPSRVSAISRSAPADKPRQKSVFSSFSFKYPLESLWPRTRETGNSRYSGLALDDAVLEENAEAGNDVVEEGRNGNWVLKILRVNSVCKGEEGKNSVVEEEKDNESNEYEENAFECDGCKVNDDDDEKEEENVEFDRDSFSRMLKRVSLAEARLYAQMSHLGNLAYSIPNINPAKLLKHYGLRLVTSSIEKKELTAATVENNPQEVETNVKEEDDEERKEQKDNGYRISASAAYHIAASAASYLHAQTRRVLPFKSSNALAGEGSLEGNSQSLDINTEMASLMATTDSVTAVVAAKEEVKQAVADDLSSTRSSPCEWFVCDDDQSGTRYFVIQGSETLASWQANLLFEPIQFEGLDVLVHRGIYEAAKGMYLQMLPEVHAHVKAHGSRATLRFSGHSLGGSLALLVNLMLLIRQEVPISSLLPVITFGSPSIMCGGDSLLNELGLPRSHVQAITMHRDIVPRAFSCNYPNHVAELLKAVNRNFRNHPCLDSQKLLFAPMGELLILQPENKFSPSHPLLPSGSGLYILTCPLSESVNTDKPLRAAQLVFMNSPHPLEMLSDRSAYGSGGTIQRDHDMNSYLKTVRSVIREELNQIRKARREQRCKVWWPLVLPSGIDGSIVVGRSMVSVNLGHNKYPFSGMIKTGRESLKRFSRLVASQHMHLFVLLLFPARLLFLGTYNMTNFR* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0407 712 Coils Coil 608 628 - -
Lan8g0407 712 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 27 708 IPR043367 GO:0008970
Lan8g0407 712 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 27 708 - -
Lan8g0407 712 MobiDBLite consensus disorder prediction 228 253 - -
Lan8g0407 712 Pfam Lipase (class 3) 358 495 IPR002921 GO:0006629
Lan8g0407 712 MobiDBLite consensus disorder prediction 234 253 - -
Lan8g0407 712 CDD Lipase_3 339 497 - -
Lan8g0407 712 SUPERFAMILY alpha/beta-Hydrolases 341 528 IPR029058 -
Lan8g0407 712 Gene3D alpha/beta hydrolase 299 522 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0407 Lan-Chr8 6291064 6294509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0407 1 712 Acyl Lipid Metabolism Gene Families AT1G02660 56.716 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0407 - - gmx:100807834 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0407 8 6291064 6294509 Lan20g0532 20 3977306 3980706 LSH
Lan8g0407 8 6291064 6294509 Lan4g1374 4 22733359 22736948 LSH
Lan4g0951 4 11994601 11998492 Lan8g0407 8 6291064 6294509 PCT
Lan8g0407 8 6291064 6294509 Lan4g0951 4 11994601 11998492 PCT