Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1374 ATGGAAACCATGTGTTTAAAAACTGGGATCTCAGCCATAGTACCCTCGATCTCCACGGCGGCGTCTGTAGACACACGCGCCGCCACTAACCCTTCTCACGTCAGCGCCAAGTCACGATCACCGGCCGCGAACAAACCGTTGCATAAGTCGGTGTTCTCCAGATTCTCATTCAAATACCCTTTGGAATCTATCTGGCCCCGGCACCGGGAAACCGGGAATAGCCGGTACAGTAGGGTTGCTCTCGACGACGCCGTATTGGAAGAGAACGCGGAAGGTGCAAACAACGTCGTTGAGGAGGAGCGGAATGAAAATTGGGTATTGAAGATTTTGCATGTGAATTCTGTGTGGAAAGGGGAAGAGACGAAGAACGGTGTCATCGGTGAAGCGAAAAGTGATGGAATCAATGAGCAAGAGAAGAAAGTGTGTGAGTGTGATGATTGTAGGGTTGAAAATGATGAAGAAGAAAAAGAAGAAGAGGTTCATTTTGATAGAGACTCGTTTTCCAGAATGCTTAGAAGGGTGTCTTTGGCTGAAGCTAGATTATATGCACAAATGTCACACTTGGGGAATTTGGCTTATTCTATTCCAAATATCAATACTGCGAAACTCTTGAAACATCATGGTCTGCGTTTGGTAACTTCATCAATAGAAAAGAAGGAATTGGCAGCAGCAACAGTTGAATGCAATCCTCAAGAAGTAGACACTAACGAAAAGGAAGAAGAAGAAGAAAGAAAGGAGCAGACAGACAATGGATACAGGATAAGTGCATCTGCTGCTTATCATATTGCTGCCACTGCTGCCTCTTATCTGCATGCTCAGACAAGGAGAGTACTTCCTTTCAAATCGTCGGATGCTGTTGATGGTGAAGGTTCACTTGAAGGTAGCAATGAAAGCCTTGACATTAACACAGAGATGGCATCTTTGATGGCAACTACTGATTCAGTGACGGCAGTTGTTGCGGCAAAGGAGGAAGTAAAGCAGGCTGTTGCAGATGATCTAAACTCAATACGTTCTTCGCCCTGTGAATGGTTCGTGTGTGATGATGATCAGAATGGTACAAGATTTTTTGTCATTCAGGGTTCTGAGACATTGGAATCCTGGCAAGCAAACCTACTTTTTGAGCCAACCCAGTTTGAGGGGTTAGATGTCCTTGTACACAGAGGTATTTATGAGGCTGCTAAAGGGATGTATCAACAGATGTTGCCAGAAGTTCATGCTCACCTAAAAGCTCACGGTTCTCACGCAACTTTCCGTTTCACCGGACATTCTCTTGGGGGAAGCTTGGCATTACTTGTAAACCTTATGCTCTTGATTAGGCAAGAAGTGCCAATCTCCTCTCTACTTCCTGTGATAACTTTTGGTTCCCCATCCATCATGTGTGGAGGTGATAGTCTTCTAAACAAGCTCGGTTTGCCACGGAGCCATGTGCAGGCTATTACAATGCACAGAGACATCGTACCACGAGCATTTTCTTGCAATTACCCTAATCAAGTTGTCGACCTACTAAAGGCTGTTAATCGTAATTTCCGTAATCATCCTTGTCTTAATAGCCAAAAACTACTATTTGCTCCAATGGGTGAACTGCTGATTCTACAACCAGACAAGAAGTTTTCACCAAGTCACCCTCTCTTGCCTTCAGGCAGTGGTTTATATGTTTTAAGTTGTCCTTTGTCTGAATCCAATAGCCCAGACAAGCTGCTCCGCGCTGCACAGTTAGTCTTCTTGAACACACCCCATCCACTTGAAATATTAAGTGACCGATCTGCTTATGGATCTGGAGGAACTATACAAAGAGATCATGACATGAATTCATACTTAAAGACTGTAAGAACCGTTATTCGCCAAGAACTTAACCAGATCCGTAAGGCGAGGAGAGAGCGACGGCGCAAGGTATGGTGGCCTCTTGTGTTACCAAGAGGAATAGATGCCAGTTTTGTTGTTGGGAGGTCCATGGTTTCAGTCAATATGGGCCACAACCAGTACCCTTTCTCTGGCATGATACAAAAAGGGAGAGAGTCCTTGAAAAGGTTCAGTAGGCTTGTTGCATCTCAACACATGCATTTGTTTGTGTTGGTCTTGTTCCCTGCACGCTTGTTACTCTTAGGGACATATAACATGATTAATTTCAGATGA 2133 0.4454 METMCLKTGISAIVPSISTAASVDTRAATNPSHVSAKSRSPAANKPLHKSVFSRFSFKYPLESIWPRHRETGNSRYSRVALDDAVLEENAEGANNVVEEERNENWVLKILHVNSVWKGEETKNGVIGEAKSDGINEQEKKVCECDDCRVENDEEEKEEEVHFDRDSFSRMLRRVSLAEARLYAQMSHLGNLAYSIPNINTAKLLKHHGLRLVTSSIEKKELAAATVECNPQEVDTNEKEEEEERKEQTDNGYRISASAAYHIAATAASYLHAQTRRVLPFKSSDAVDGEGSLEGSNESLDINTEMASLMATTDSVTAVVAAKEEVKQAVADDLNSIRSSPCEWFVCDDDQNGTRFFVIQGSETLESWQANLLFEPTQFEGLDVLVHRGIYEAAKGMYQQMLPEVHAHLKAHGSHATFRFTGHSLGGSLALLVNLMLLIRQEVPISSLLPVITFGSPSIMCGGDSLLNKLGLPRSHVQAITMHRDIVPRAFSCNYPNQVVDLLKAVNRNFRNHPCLNSQKLLFAPMGELLILQPDKKFSPSHPLLPSGSGLYVLSCPLSESNSPDKLLRAAQLVFLNTPHPLEILSDRSAYGSGGTIQRDHDMNSYLKTVRTVIRQELNQIRKARRERRRKVWWPLVLPRGIDASFVVGRSMVSVNMGHNQYPFSGMIQKGRESLKRFSRLVASQHMHLFVLVLFPARLLLLGTYNMINFR* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1374 710 Coils Coil 606 626 - -
Lan4g1374 710 Coils Coil 83 103 - -
Lan4g1374 710 SUPERFAMILY alpha/beta-Hydrolases 339 528 IPR029058 -
Lan4g1374 710 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 29 707 IPR043367 GO:0008970
Lan4g1374 710 CDD Lipase_3 333 497 - -
Lan4g1374 710 Gene3D alpha/beta hydrolase 298 519 IPR029058 -
Lan4g1374 710 MobiDBLite consensus disorder prediction 229 249 - -
Lan4g1374 710 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 29 707 - -
Lan4g1374 710 Pfam Lipase (class 3) 356 493 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1374 Lan-Chr4 22733359 22736948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1374 1 710 Acyl Lipid Metabolism Gene Families AT1G02660 55.000 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1374 - - gmx:100807834 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1374 4 22733359 22736948 Lan4g1374 4 22733359 22736948 ECH
Lan8g0407 8 6291064 6294509 Lan4g1374 4 22733359 22736948 LSH
Lan20g0532 20 3977306 3980706 Lan4g1374 4 22733359 22736948 LSH
Lan4g0951 4 11994601 11998492 Lan4g1374 4 22733359 22736948 PCT
Lan4g1374 4 22733359 22736948 Lan4g0951 4 11994601 11998492 PCT