Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0532 ATGGAAACCATGTGTTTAAAAACTGGGATCTCAGGCATTGTTCCGTCGATCTCCACGGCCGCATCGTTGAGTGCACGCGCCGCCACCAACCCTTCTCACGTGAGCGCAATGAGTCGCTCAGATAAACCATCGCAGAAATCTGCGTTCTCCAGATTCTCCTTTAAATACCCCCTGGACTCTCTCTGGCCGCGGCCACGGGAAACCGGGAATAGCCGGTACAGTGGAGTTTCCGTCAACGACGCCGTATTGGAAGAGAACGCAGAAGCTGAAAACGACGTCGTTGAGAGTAGAGCGGAGGAGGGACAGAATGGGAATTGGATATTGAAGATTTTGCGTGTGAAAACTGTGTGGAAAGAGGAAGAAGGAAAGGAAGGTGTTGTTGAAGAAGAGAAGGGTGGTGAAAGCAACGAGTGTGAGTGTGATTGTTGTAACGTTGACGATGATGATGAAAAAGTAGAAGAGGAGGTTCAATTTGATAGAGACTCGTTTTCAAGAATGTTAAGAAGGGTGTCTTTAGTTGAAGCTAGATTATATGCTCAAATGTCACACTTGGGGAACTTGGCATATTCTATACCAAATATCAATCCGGCAAAACTCTTGAAACACTATGGTCTACGTTTTGTAACTTCATCAATAGAGAAGAAGGAATTGGCAGCAGCAACAGTTGAAAACAATCCCGAAGAAGTAGAAACTAATGAAAAGGAAGAAGAAAGAAATAAGCAGAAAGACAATGCATACAGGTTAAGTGCATCTGCTGCTTATCATATTGCTGCCTCTGCTGCCTCTTATCTGCATGCTCAGACAAGGAGAGTACTTCCATTCAAATCTTCTGATGCAGTTGATGGTGAAGGTTCACTCGAAGAAAGCAACGAAAGCCTTGACATTAATACAGAGATTGCATCTTTGATGGCAACTACAGATTCTGTGACAGCAGTTGTTGCGGCAAAGGAGGAAGTAAAGCAGGCTGTTGCAGATGATCTAAACTCAACACGTTCTTCACCCTGCGAATGGTTTGTGTGCGATGATGACCAGAGCGGTACAAGATTCTTTATTATTCAGGGTTCCGAAACGTTGGCATCCTGGCAAGCAAACCTACTTTTTGAGCCGATTCAGTTTGAGGGGTTGGATGTCCTTGTGCACAGAGGTATTTATGAGGCTGCTAAAGGGATGTATCAACAGATGTTGCCAGAAGTTCATGCTCACCTAAAAGCTCACGGTTCTTGCTCAACTTTCCGTTTCACTGGGCATTCTCTCGGGGGAAGCTTGGCATTACTTGTAAATTTTATGCTCTTGATAAGGCAAGAAGTGCCAGTCTCCTCTCTACTTCCTGTGATAACTTTTGGTTCCCCATCCATCATGTGTGGAGGTGATAGTCTGCTAAACAAGCTCGGATTACCACGGAGCCATGTGCAATCTATTACAATGCACAGAGACATTGTACCACGAGCATTTTCTTGCAGTTACCCTAATCATGTTGCCAAACTACTAAAGGCCATCAATCGGAATTTCCGTAACCATCCTTGTCTTAATAGCCAAAAACTACTATTTGCACCGATGGGTGAACTGCTGATTCTACAACCAAACAAGAAGTTTTCACCGAGCCATCCTCTGTTGCCTTCAGGCAGTGGTCTATATATTTTGAGTTGTCCTTTGTCAGAATCCAATGAGACAGACAATCTTATCCGGGCTGCTCAGTTAGTCTTCTTGAACTCACCCCATCCACTTGAGATATTAAGTGACCGATCAGCTTATGGATCTGGAGGAACAATAAAAAGGGATCATGACATGAGTTCCTACTTAAAGACTGTAAGAACTGTGATACGTCAAGAACTTAACCAGATCCGTAAGGCGAGGAGAGAGCAAAGGCGGAAGGTACAATGGCCTATTGTATTTCCAAGAGGAATTGATGCAAGCTTTGTTGTTGGGAGGTCCATGGTTTCAGTCAATCTGGGTCACAACCAGTACCCCTTCTTTGGCATGATACAAACAGGGAGAGAGTCCTTGAAAAGGTTCAGCAGGCTTGTTGCATCACAGCATATGCACTTGTTTGTGTTGCTATTATTCCCTGCACGGTTGTTGCTCTTAGGAGCATATAACGTGATTAATTTCAGATGA 2115 0.4426 METMCLKTGISGIVPSISTAASLSARAATNPSHVSAMSRSDKPSQKSAFSRFSFKYPLDSLWPRPRETGNSRYSGVSVNDAVLEENAEAENDVVESRAEEGQNGNWILKILRVKTVWKEEEGKEGVVEEEKGGESNECECDCCNVDDDDEKVEEEVQFDRDSFSRMLRRVSLVEARLYAQMSHLGNLAYSIPNINPAKLLKHYGLRFVTSSIEKKELAAATVENNPEEVETNEKEEERNKQKDNAYRLSASAAYHIAASAASYLHAQTRRVLPFKSSDAVDGEGSLEESNESLDINTEIASLMATTDSVTAVVAAKEEVKQAVADDLNSTRSSPCEWFVCDDDQSGTRFFIIQGSETLASWQANLLFEPIQFEGLDVLVHRGIYEAAKGMYQQMLPEVHAHLKAHGSCSTFRFTGHSLGGSLALLVNFMLLIRQEVPVSSLLPVITFGSPSIMCGGDSLLNKLGLPRSHVQSITMHRDIVPRAFSCSYPNHVAKLLKAINRNFRNHPCLNSQKLLFAPMGELLILQPNKKFSPSHPLLPSGSGLYILSCPLSESNETDNLIRAAQLVFLNSPHPLEILSDRSAYGSGGTIKRDHDMSSYLKTVRTVIRQELNQIRKARREQRRKVQWPIVFPRGIDASFVVGRSMVSVNLGHNQYPFFGMIQTGRESLKRFSRLVASQHMHLFVLLLFPARLLLLGAYNVINFR* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0532 704 Coils Coil 79 99 - -
Lan20g0532 704 MobiDBLite consensus disorder prediction 227 243 - -
Lan20g0532 704 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 23 701 IPR043367 GO:0008970
Lan20g0532 704 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 23 701 - -
Lan20g0532 704 Coils Coil 600 620 - -
Lan20g0532 704 CDD Lipase_3 331 489 - -
Lan20g0532 704 Gene3D alpha/beta hydrolase 292 514 IPR029058 -
Lan20g0532 704 MobiDBLite consensus disorder prediction 219 243 - -
Lan20g0532 704 Pfam Lipase (class 3) 350 486 IPR002921 GO:0006629
Lan20g0532 704 SUPERFAMILY alpha/beta-Hydrolases 333 522 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0532 Lan-Chr20 3977306 3980706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0532 1 704 Acyl Lipid Metabolism Gene Families AT1G02660 55.556 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0532 - - gmx:100807834 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0407 8 6291064 6294509 Lan20g0532 20 3977306 3980706 LSH
Lan20g0532 20 3977306 3980706 Lan4g1374 4 22733359 22736948 LSH
Lan4g0951 4 11994601 11998492 Lan20g0532 20 3977306 3980706 PCT
Lan20g0532 20 3977306 3980706 Lan4g0951 4 11994601 11998492 PCT