Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0394 ATGGAGATGGTATCTGCAAACACAACCCAGGAGAAAGGGGTACTTGGAAGAGTGTGGGAACGGATAATAACCTTGACAAAAGCTTTTAAGGAGAAGGTGTGGGAAATTTGTAGAATGACAAAAAAGATAGCACAAGATGACCCTAGAAAAGTTATTCATTCACTTAAAGTAGGACTTGCAATATCACTTGTGTCTCTATTCTATTACTATCAACCACTATATGAGAACTTTGGTCTCTCTGCAATGTGGGCTGTGATGACTGTAGTGGTAGTTTTTGAGTACACTGTGGGAGCCACTCTAGGAAAAGGTTTGAATAGAACATTGGCAACCTTGATGGCTGGTACTCTTGGTGTTGGGGCTCATTACTTGGCTAGCCTAGCAGGAGAGAAAGTAGAACCCATATTGATTGGCTTCTTTGTTTTCCTACAAGCTGCAATAGTATCATTTATAAGGTTTATTCCCAAAGTGAAGGCAAGATATGATTATGGGTTCCTGATATTTATTTTGACATTCTCTTTGATATCAGTCTCTGGTTTTCGTGATGATGAAGTGCTGGAAATGGCACACAAGAGATTGTCCACCATTTTCATAGGAGGTTCTGCTTGTGTTGTGATTTCCATTTTTGTTTGTCCTGTGTGGGCCGGTGAAGAACTCCACTATTCAATTGCACTCAACTTGGAAAAACTTAGTGATTTCTTACAAGCATTTATATGTGAGTACTTCACAACATTAGAGGATGGAGATTCTACAAATATCATGTCTTGTCTGGAACGTTATAAAAGTGTCCTTAATTCCAAAAGTTCTGAAGAGTCTCTGGCCAATTTTGCTAGATGGGAACCTGGTCATGGCAAATTCAGATTTCGTCACCCATGGGACCAATACCTTAAAATTGGCACCCTTAGCCGTCAATGTGCATATAGAATGGAAGCTCTCAAAGGATACCTCAATTCAGACAATCAAGGATCTTCAGAAATTCGATCTATGATGGAAGAGGCAAGCTTAGAAATGACAATGGAATCTACAAAAGCTTTGAAGGAACTAGGATTGTCTATAAAAACAATGACAAAACCATTTTCTGCTGATATTCATATTGCAAACTCAAAAGCTGCAAGCAAGAGACTTAAATCATTACTTCAATCAAGCTTAAGAGAAGAAACAGATCTTTTATCAGTGATACCAGTTGGAACAGTAGCTTCATTACTAATTGATATTGCAGATTGTACAGAGAAACTTGCAGATTGTGTTAATGATCTTGCCTCCCTCACAAATTTTGATGATGTAGAATCAAATAAATGTCCAAAAATATCACAATCTTCATACTGTGAATGTGCTGAACCGGATCCTAAGATTGATGCTTCTGATGTTGTTATTCTAGTTGAGGATTCAGCTCTAGCTATGCCAGATTGTGAAAAAACAAAATCTGATCAACATAACATCGTTTGA 1443 0.3791 MEMVSANTTQEKGVLGRVWERIITLTKAFKEKVWEICRMTKKIAQDDPRKVIHSLKVGLAISLVSLFYYYQPLYENFGLSAMWAVMTVVVVFEYTVGATLGKGLNRTLATLMAGTLGVGAHYLASLAGEKVEPILIGFFVFLQAAIVSFIRFIPKVKARYDYGFLIFILTFSLISVSGFRDDEVLEMAHKRLSTIFIGGSACVVISIFVCPVWAGEELHYSIALNLEKLSDFLQAFICEYFTTLEDGDSTNIMSCLERYKSVLNSKSSEESLANFARWEPGHGKFRFRHPWDQYLKIGTLSRQCAYRMEALKGYLNSDNQGSSEIRSMMEEASLEMTMESTKALKELGLSIKTMTKPFSADIHIANSKAASKRLKSLLQSSLREETDLLSVIPVGTVASLLIDIADCTEKLADCVNDLASLTNFDDVESNKCPKISQSSYCECAEPDPKIDASDVVILVEDSALAMPDCEKTKSDQHNIV* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0394 480 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 436 - -
Lan7g0394 480 Pfam Aluminium activated malate transporter 42 419 IPR020966 GO:0015743
Lan7g0394 480 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 7 1 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0394 Lan-Chr7 2687496 2690347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0394 31 420 Miscellaneous Gene Families AT1G08440 60.051 3.99e-176 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0394 - - aprc:113859727 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0394 7 2687496 2690347 Lan7g0394 7 2687496 2690347 ECH
Lan7g0394 7 2687496 2690347 Lan13g0449 13 3260889 3264299 LSH
Lan6g1861 6 29743765 29748384 Lan7g0394 7 2687496 2690347 PCT
Lan10g0014 10 82377 84722 Lan7g0394 7 2687496 2690347 PCT
Lan7g0394 7 2687496 2690347 Lan6g1861 6 29743765 29748384 PCT
Lan7g0394 7 2687496 2690347 Lan10g0014 10 82377 84722 PCT