Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1861 ATGGCATTGTCTGGTGCTGAATACACTAGAGATTGTAGTTGCCCTCATACCTTACCTGAGAAATTATGGTGTAGGTTAGTAGAACTCACAAAGATTGCAATGAAATTTGGACAAGATCACCCCAGAAGACTTATTCATTCCTTTAAGGTTGGAGTGGCACTAGTATTGATTTCAACTCTGCATCATTTTCGTCCCTCCTTCTATGCTTTTGGTGACAATATTATGTGGGCAGTTCTTACCGTTGTTGTTGTCTTAGAATTTTCTGTTGGTGCAACACTGGGAAAAGGTTTAAATAGGATGTTGGCAACGTTTTTAGCTGGTGGTCTTGGTGTTGGAACTCATTGCCTAGCAAATCTTTCTGGAAAGAAAGGAGAGGCTGTGTTGACTCCGATCTTTATCTTTCTGATAGCTGGAACAGTGACATTAATGAGATTTTCCCCTAGATTCAAAGTGAGATATGATTATGGGTTGATCATATTTATATTAACCTTCTGCTTGGTATCTCTTTCGGATGAGAAAGAGAGTGAAATGCTAGAAATTGCACATGAAAGATTGCTAACAATAATTATTGGAAGTTGTATAGCTGTTATGGTATGTATTTGCATATGCCCTGTTTGGGCTGGTGAGGATCTTCACAATGAGATTGCTGGCAACATGGAAAAGCTTGCCGACTTTTTTGAAGGATTTAGTGATGAGTACTTCAACAATTCAGATACTACACATGTTGTTCAAGATAAATCGTTTATGCATCGATATAAAAGTGTCCTCTCTTCAAAAAGTAGTGAAGAAACAATGGCTGTTTTGGCAAGATGGGAACCTTGTCATGGAAAGTTCAAATTTCACCATCCATGGAAGCAATACTTAAAGATTGGTAACCAAACAAGAGTGTGTGCTTACAAAATTGAAGCTCTTAGTGCCTATCTCCTCCACTCCAAGCAAAACCCGCATGAAGTTCAAAGCATGATTCAAGAGTCATGCACTATTATTAGCTCAGAATGTGGTAAAACCCTAAAAGAATCATCATTGGGAGTTAGACACATGACTAAGTCATCAATGCCAAATCAACATGTTGCAAATGCTAAAAATGCAGTTGAATCTCTTAAATCAGTTCTAAGAACAAACCCATGGGAAGGAGCAGATTATGTAGATATAATAGCGGTTGCTGCAGTGGCTTCATTACTAATTGATGTTGTGGATTGCATTGAGAAAATTTGTGAAGCAATTGAGGAACTGGCATCACTCGCAAGATTTGTACCTTCCCAGTTACTTCATCAGGGAACAGTTCAACCAATTTCCAAACGTGATGATTCCATTCATGTTATCATAATTGATGAGATTACTCCAAGATTATATGAATAA 1359 0.379 MALSGAEYTRDCSCPHTLPEKLWCRLVELTKIAMKFGQDHPRRLIHSFKVGVALVLISTLHHFRPSFYAFGDNIMWAVLTVVVVLEFSVGATLGKGLNRMLATFLAGGLGVGTHCLANLSGKKGEAVLTPIFIFLIAGTVTLMRFSPRFKVRYDYGLIIFILTFCLVSLSDEKESEMLEIAHERLLTIIIGSCIAVMVCICICPVWAGEDLHNEIAGNMEKLADFFEGFSDEYFNNSDTTHVVQDKSFMHRYKSVLSSKSSEETMAVLARWEPCHGKFKFHHPWKQYLKIGNQTRVCAYKIEALSAYLLHSKQNPHEVQSMIQESCTIISSECGKTLKESSLGVRHMTKSSMPNQHVANAKNAVESLKSVLRTNPWEGADYVDIIAVAAVASLLIDVVDCIEKICEAIEELASLARFVPSQLLHQGTVQPISKRDDSIHVIIIDEITPRLYE* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1861 452 Pfam Aluminium activated malate transporter 35 412 IPR020966 GO:0015743
Lan6g1861 452 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 9 424 - -
Lan6g1861 452 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 9 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1861 Lan-Chr6 29743765 29748384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1861 25 443 Miscellaneous Gene Families AT1G08440 44.860 7.08e-135 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1861 - - lang:109357894 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1861 6 29743765 29748384 Lan10g0014 10 82377 84722 LSH
Lan6g1861 6 29743765 29748384 Lan7g0394 7 2687496 2690347 PCT
Lan6g1861 6 29743765 29748384 Lan13g0449 13 3260889 3264299 PCT
Lan7g0394 7 2687496 2690347 Lan6g1861 6 29743765 29748384 PCT
Lan13g0449 13 3260889 3264299 Lan6g1861 6 29743765 29748384 PCT