Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0449 ATGGAGATGGCATCTCTAAACACAAACCAAGAGAAAGGGATACTTGGTAGAGTGTTTGAATGGCTAATAACTTTGGCAAAAGATTTTAAGGAGAAGGTGTTTGAAATTTGTAGAATGTCAAAAAAGATAGCAGAAGATGACCCTAGAAAAGTTATTCATTCACTTAAAGTGGGACTTGCAATCTCATTGGTGTCTCTATTCTATTACTATCAACCACTATATGAGAATTTTGGACTCTCTGCAATGTGGGCTGTGATGACTGTAGTGGTAGTTTTTGAGTACACTGTGGGAGCCACTCTAGGAAAAGGTTTGAATAGAACATTGGCAACCTTGATGGCTGGTACTCTTGGTGTTGGGGCTCATTACTTGGCTAGCCTAGCAGGAGAGAAGGCAGAACCCATATTGATTGGTTTCTTTGTTTTCCTCCAAGCTGCAATAGTATCATTTATAAGGTTTTTCCCCAAAGTGAAAGCAAGATATGATTATGGGTTCCTGGTATTTATTTTGACATTCTCTTTGATATCTGTATCTGGTTTTCGTGATGATGAAGTATTGGAAATGGCACACAAGAGATTATCCACCATTTTCATAGGAGGTTCAGCTTGTGTTATGATTTCCATTTTTGTTTGTCCTGTATGGGCTGGTGAAGAGCTCCACTATTCCATTGCAATCAACTTGGAAAAACTTAGTGATTTCTTAGAAGCATTTGTATGTGGGTACTTCACAACATTAGATGAAGGAGGTTTTGTGAATTTTCCTTGTCTGGAAGCTTATAAAAGCATCCTTAATTCTAAAAGCTCTGAAGAGTCTTTGGCCAATTTTGCAAAATGGGAACCTGGTCATGGCAAGTTTAAATTTAGTCACCCGTGGGATCAATACCTCAAAATTGGCACCATTACTCATCAATGTGCATATAGAATGGAAGCTCTCAAAGAATACCTCAATTCAAATACCCAAGGATCTTCAGAAATTAGGTCTATGATCGAAGAGGTGAGCTTAGAAATGACTATGGAATCTAGCAAAGCTTTGAAAGAACTAGGATTATCAATCAAAACAATGACAAGGTCATCTTCTGCTGATATTCATATTGCAAACTCAAAAGCATCAAGCAAGAGACTTAAGTCATTGCTCCAATCACGCTTAAGGGAAGAAACTGATCTTCTCTCAGTGATATCAGTTGGAACAGTAGCTTCACTACTAATTGATATCACTGATTTCACAGAGAAACTATCAGATTGTGTTAATTATCTTGCCTCCCTCACAAATTTTGATGCTGTAGAGACAAATAAATACCCACAAATATCTCGATCTCCATACTGTGAATGTGCTGATCCGGATCCCAAGATTGAAACCTCACATGTTGCTGTTATTCTAGTTGAGGAATCAAGTCTAGCTAAGCCTTGTGGAAAATCAATATCTGTTCAACATAACAATGTTTGA 1440 0.3771 MEMASLNTNQEKGILGRVFEWLITLAKDFKEKVFEICRMSKKIAEDDPRKVIHSLKVGLAISLVSLFYYYQPLYENFGLSAMWAVMTVVVVFEYTVGATLGKGLNRTLATLMAGTLGVGAHYLASLAGEKAEPILIGFFVFLQAAIVSFIRFFPKVKARYDYGFLVFILTFSLISVSGFRDDEVLEMAHKRLSTIFIGGSACVMISIFVCPVWAGEELHYSIAINLEKLSDFLEAFVCGYFTTLDEGGFVNFPCLEAYKSILNSKSSEESLANFAKWEPGHGKFKFSHPWDQYLKIGTITHQCAYRMEALKEYLNSNTQGSSEIRSMIEEVSLEMTMESSKALKELGLSIKTMTRSSSADIHIANSKASSKRLKSLLQSRLREETDLLSVISVGTVASLLIDITDFTEKLSDCVNYLASLTNFDAVETNKYPQISRSPYCECADPDPKIETSHVAVILVEESSLAKPCGKSISVQHNNV* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0449 479 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 434 - -
Lan13g0449 479 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 7 1 434 - -
Lan13g0449 479 Pfam Aluminium activated malate transporter 42 418 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0449 Lan-Chr13 3260889 3264299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0449 31 419 Miscellaneous Gene Families AT1G08440 58.015 1.66e-169 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0449 - - aprc:113859727 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0394 7 2687496 2690347 Lan13g0449 13 3260889 3264299 LSH
Lan6g1861 6 29743765 29748384 Lan13g0449 13 3260889 3264299 PCT
Lan10g0014 10 82377 84722 Lan13g0449 13 3260889 3264299 PCT
Lan13g0449 13 3260889 3264299 Lan6g1861 6 29743765 29748384 PCT
Lan13g0449 13 3260889 3264299 Lan10g0014 10 82377 84722 PCT