Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0345 ATGCATACTCTTTCTCACCCCTATTCCAATGTTCTCAATTTTTTCAATCACTCGCGCCCTTCTTTTTGTCGGGTCGGGGCGACCCGAATTTCCATCAAATGCGGTCACGGGTTTGAATCTGTTTATGGATTCGGATCTGCCCGAAGCGATTGGCAGAGCGATTGTGCTATCTTAACCAGTAAAGTTGATTCGCTGAAGGATTCTCATGTCGTCAATGAAAATAGCAACGGCGGTGCTGATCATGTCGCCGCCGTCAACGGCCACACTTCTGCTGTATCCAATCTCAATCTGGTTCCAATTGAAAGCAAAAAACAGATTCAGCCTAAGCCTCTAACCATCTCTGATTTGTCTCCGGCGCCGATACACGGCTCGCAGTTGCGGGTGGCGTACCAGGGAGTCCCTGGTGCTTACTCCGAAGCCGCCGCCGGGAAAGCGTATCCGGATAGTCAGGTTATTCCGTGTGACCAGTTCGAGGTGGCGTTCCAAGCGGTGGAGCTATGGATCGCCGATCGTGCGGTTCTACCGGTGGAGAATTCCCTCGGCGGATCGATCCACCGCAACTATGATCTCCTCCTCCGCCACCGCCTCCACATCGTTGGTGAGGTCCAGCTCCCTGTCCACCACTGTCTCCTCGCACTCCCCGATGTTCGAAAAGAGTACTTGACGCGCGTGATCTCACATCCTCAAGCTCTAGCACAATGTGAACACACCTTAACCAAACTAGGTCTCAACGTTGCTCGCGAAGCCGTCGATGACACCGCCGGAGCCGCTGAGTTTGTCGCCACGAACAACCTCCGAGACACGGCTGCGATCGCTAGCGCACGTGCCGCGGAACTCTACGGTTTACAAATTCTGGCAGACGGAATTCAAGATGATCCGAATAACGTGACACGGTTCGTAATGCTGGCCAGAGAACCCGTTATTCCTCGAACGGATCGACCATTCAAAACTAGCATCGTTTTCGCACACGATAAGGGAACTTCAGTGCTGTTTAAAGTTCTCTCTGCGTTTGCGTTTAGGAATATCAGTTTGACTAAGATTGAGTCAAGGCCTCATCGTAACCGTCCGATTAGGGTGGTAGATGATGAGAGTGAAGGTACTGCGAAGCACTTTGAGTACATGTTTTATGTTGATTTTGAGGCTTCTATGGCTCAAGTTAAGGCACAGAATGCACTTGCAGAGGTTCAAGAATTCACGTCTTTCTTGCGAGTGTTGGGGAGTTACCCTATGGATATGACACCTTGGAACCCCTCTTCTTGTCGCGGGGGAGATTAG 1275 0.5122 MHTLSHPYSNVLNFFNHSRPSFCRVGATRISIKCGHGFESVYGFGSARSDWQSDCAILTSKVDSLKDSHVVNENSNGGADHVAAVNGHTSAVSNLNLVPIESKKQIQPKPLTISDLSPAPIHGSQLRVAYQGVPGAYSEAAAGKAYPDSQVIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPDVRKEYLTRVISHPQALAQCEHTLTKLGLNVAREAVDDTAGAAEFVATNNLRDTAAIASARAAELYGLQILADGIQDDPNNVTRFVMLAREPVIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRVVDDESEGTAKHFEYMFYVDFEASMAQVKAQNALAEVQEFTSFLRVLGSYPMDMTPWNPSSCRGGD* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0345 424 Gene3D - 311 412 - -
Lan7g0345 424 ProSiteProfiles Prephenate dehydratase domain profile. 127 304 IPR001086 GO:0004664|GO:0009094
Lan7g0345 424 PANTHER AROGENATE DEHYDRATASE 37 419 - -
Lan7g0345 424 SUPERFAMILY ACT-like 299 411 IPR045865 -
Lan7g0345 424 CDD ACT_CM-PDT 316 409 - -
Lan7g0345 424 SUPERFAMILY Periplasmic binding protein-like II 127 310 - -
Lan7g0345 424 ProSitePatterns Prephenate dehydratase signature 2. 344 351 IPR018528 GO:0004664|GO:0009094
Lan7g0345 424 Gene3D - 211 292 - -
Lan7g0345 424 Gene3D - 122 210 - -
Lan7g0345 424 ProSitePatterns Prephenate dehydratase signature 1. 280 302 IPR018528 GO:0004664|GO:0009094
Lan7g0345 424 CDD PBP2_Ct-PDT_like 127 306 - -
Lan7g0345 424 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 37 419 - -
Lan7g0345 424 Pfam Prephenate dehydratase 128 306 IPR001086 GO:0004664|GO:0009094
Lan7g0345 424 ProSiteProfiles ACT domain profile. 318 409 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0345 Lan-Chr7 2368048 2369680 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0345 K05359 - gmx:100809331 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0345 7 2368048 2369680 Lan7g0345 7 2368048 2369680 ECH
Lan6g2035 6 31099080 31100523 Lan7g0345 7 2368048 2369680 PCT
Lan3g0119 3 824572 826062 Lan7g0345 7 2368048 2369680 PCT
Lan7g0345 7 2368048 2369680 Lan6g2035 6 31099080 31100523 PCT
Lan7g0345 7 2368048 2369680 Lan3g0119 3 824572 826062 PCT