Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0119 ATGCATTCTATTTCGTTTCCTTATTCTAACACACTCAATCTCAACCACATATTTTCTCCGAAACGGGTTGCCCCGACTCGATTAACGGTTAGATCCGTTTACGGTTTTGAACCGTTAACCAGATCCGATTGGCAAAGTTCATGTGCTATCTTAACAAGCAACGTTGCCTCTCAGGAACTTAACGACGGCGCCGCCGCCGATCATGTTCCCGCCGTCAATGATCATAAAAACGCTTTCACTGATCTCAAACTACTTCCTAACGGAAAACTAACAGTCGGAGAAAAAAACGACAAACCTTTTCAACCGAAGCCGCTGACTATTTCCGACCTATCTCCGGCGCCGATGCACGGTTCGCAACTCAGAGTCGCGTATCAAGGTGTCCCCGGTGCTTACTCCGAAGCCGCCGCTGGAAAAGCTTATCCAAACTGTGAAGCTATTCCGTGTGACCAGTTCGACGTTGCGTTTAAAGCGGTGGAGCTTTGGATCGCAGATCGAGCGGTTTTACCGGTGGAAAACTCCCTCGGTGGTTCTATTCACCGGAACTACGACCTTCTCCTCCGTCACCGTCTCCACATCGTCGGCGAGGTTCAGCTCCCGGTGCACCACTGCCTCCTCGCTCTCCCTGGGATCCGAAAAGAGTACTTGACCCGAGTCATTTCACATCCTCAAGCTCTTTCCCAATGTGAACACACTCTCACGAAACTAGGCCTCAACGTGGCGCGTGAAGCGGTTGACGACACTGCCGGAGCAGCAGAATTCGTTGCTAACAACAATCTACGCGACACCGCAGCGATTGCGAGTGCACGCGCCGCAGATCTCTACGGTTTAAACGTTTTAGCAGATGGAATCCAAGATGATCCGAATAACGTGACCCGATTCGTTATGCTCGCCCGAGAACCCATTATTCCGAGAACGGATCGTCCGTTTAAGACGAGCATCGTTTTCGCGCACGATAAGGGTACTTCGGTACTTTTCAAAGTTCTTTCAGCGTTTGCGTTTAGGAATATAAGTTTAACGAAGATCGAATCAAGGCCTCATAGGAACCGTCCGATTAGGCTTGTTGATGATGAAAACGTGGGAACTGCGAAACACTTTGAGTATTTGTTCTACGTTGATTTTGAAGCTTCTATGGCTGATGTAAGAGCACAAAACGCGTTATCAGAAGTTCAAGAATTCACGTCGTTTTTGAGGGTATTGGGTAGTTATCCTATGGACATGACCCCATGGAATCCCTCCTCTTCAATTGGAGATCATCATTAG 1260 0.4857 MHSISFPYSNTLNLNHIFSPKRVAPTRLTVRSVYGFEPLTRSDWQSSCAILTSNVASQELNDGAAADHVPAVNDHKNAFTDLKLLPNGKLTVGEKNDKPFQPKPLTISDLSPAPMHGSQLRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFDVAFKAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGIRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEFVANNNLRDTAAIASARAADLYGLNVLADGIQDDPNNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDENVGTAKHFEYLFYVDFEASMADVRAQNALSEVQEFTSFLRVLGSYPMDMTPWNPSSSIGDHH* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0119 419 Gene3D - 305 406 - -
Lan3g0119 419 Gene3D - 116 204 - -
Lan3g0119 419 ProSiteProfiles Prephenate dehydratase domain profile. 121 298 IPR001086 GO:0004664|GO:0009094
Lan3g0119 419 ProSitePatterns Prephenate dehydratase signature 1. 274 296 IPR018528 GO:0004664|GO:0009094
Lan3g0119 419 Gene3D - 205 286 - -
Lan3g0119 419 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 30 413 - -
Lan3g0119 419 CDD PBP2_Ct-PDT_like 121 300 - -
Lan3g0119 419 Pfam Prephenate dehydratase 122 300 IPR001086 GO:0004664|GO:0009094
Lan3g0119 419 ProSiteProfiles ACT domain profile. 312 403 IPR002912 -
Lan3g0119 419 PANTHER AROGENATE DEHYDRATASE 30 413 - -
Lan3g0119 419 SUPERFAMILY Periplasmic binding protein-like II 121 304 - -
Lan3g0119 419 CDD ACT_CM-PDT 310 403 - -
Lan3g0119 419 ProSitePatterns Prephenate dehydratase signature 2. 338 345 IPR018528 GO:0004664|GO:0009094
Lan3g0119 419 SUPERFAMILY ACT-like 293 405 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0119 Lan-Chr3 824572 826062 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0119 K05359 - gmx:100797636 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2035 6 31099080 31100523 Lan3g0119 3 824572 826062 LSH
Lan3g0119 3 824572 826062 Lan7g0345 7 2368048 2369680 PCT
Lan7g0345 7 2368048 2369680 Lan3g0119 3 824572 826062 PCT