Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2035 ATGCATTCTCTTTCTCCTTCGTATTCTACCACTCTCAATCTCAACCATATCCTTTCCCTAAACCGGGTCGCTCCGACCCGAATAACTGTCAAATGCGGTTACGGATTCGAACCGTTTAGCAGATCCGATTGGCAAAGTTCGTGTGCTATCTTAACAAGTAAAGTTGCTTCTCAGGAACGTAACGGCGGTGGCTCCGATCATGTTCCCGCCGTTAACGGTCATAAAACTGCTTTCACTGACCTCAAACTCATTCCTATCGGAAACGTTTCAGTCGGCGAGAATAACAAACTGTTACAACCGAAACCGCTCTCGATTTCAGATCTCTCTCCGGCTCCGATGCATGGTTCGAGTCTCAGAGTCGCGTACCAAGGCGCTCCCGGTGCGTATTCAGAAGCTGCTGCCGGAAAAGCTTATCCAAACTGCGAGGCTATTCCGTGTGACCAGTTTGACGTAGCGTTCAAAGCGGTGGAGCTTTGGATCGCAGATCGAGCGGTTCTTCCGATTGAAAACTCCCTCGGAGGTTCGATTCACCGTAACTACGATCTCCTCCTCCGTCACCGCCTCCACATCGTCGGCGAAGTTCAACTCCCCGTTCATCACTGCCTCCTCGCTCTCCCAGGGATCCGAAAAGAGTACTTAACACGAGTAATCTCACATCCTCAAGCTCTAGCACAATGCGAACACTCTCTCACTAAACTAGGCCTCAACGTGGCGCGTGAGGCGGTTGATGACACCGCCGGAGCTGCGGAATTCGTCGCTGCGAATTCCCTACGCGATACCGCAGCGATTGCAAGCTCACGCGCCGCGGAACTATACGGTTTAAATGTTTTAGCCGATGGAATTCAAGACGATCCGAGTAACGTGACTCGGTTTGTTATGTTAGCGCGAGAACCGATTATTCCTAGAACGGATCGTCCTTTCAAGACGAGTATAGTTTTCGCACATGATAAGGGTACTTCGGTACTTTTCAAAGTGCTTTCAGCATTTGCGTTTAGGAATATAAGTTTAACGAAGATTGAATCAAGGCCTCATAGGAACCGTCCGATTAGGCTAGTTGATGATGAGAATGTGGGAACAGCGAAACACTTTGAGTATTTGTTTTACGTTGATTTTGAAGCTTCTATGGCTGATGTTAGAGCACAAAACGCGTTGGCGGAAGTTCAGGAATTCACGTCGTTTTTGCGAGTGTTGGGGAGTTATCCTATGGATATGACTCCATGGACTCCTTCATCTTCAATTGAAAATATTCAATAA 1254 0.4809 MHSLSPSYSTTLNLNHILSLNRVAPTRITVKCGYGFEPFSRSDWQSSCAILTSKVASQERNGGGSDHVPAVNGHKTAFTDLKLIPIGNVSVGENNKLLQPKPLSISDLSPAPMHGSSLRVAYQGAPGAYSEAAAGKAYPNCEAIPCDQFDVAFKAVELWIADRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGIRKEYLTRVISHPQALAQCEHSLTKLGLNVAREAVDDTAGAAEFVAANSLRDTAAIASSRAAELYGLNVLADGIQDDPSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDENVGTAKHFEYLFYVDFEASMADVRAQNALAEVQEFTSFLRVLGSYPMDMTPWTPSSSIENIQ* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2035 417 Gene3D - 303 404 - -
Lan6g2035 417 ProSiteProfiles Prephenate dehydratase domain profile. 119 296 IPR001086 GO:0004664|GO:0009094
Lan6g2035 417 Gene3D - 114 202 - -
Lan6g2035 417 ProSitePatterns Prephenate dehydratase signature 2. 336 343 IPR018528 GO:0004664|GO:0009094
Lan6g2035 417 CDD ACT_CM-PDT 308 401 - -
Lan6g2035 417 PANTHER AROGENATE DEHYDRATASE 31 411 - -
Lan6g2035 417 SUPERFAMILY Periplasmic binding protein-like II 119 302 - -
Lan6g2035 417 ProSiteProfiles ACT domain profile. 310 401 IPR002912 -
Lan6g2035 417 CDD PBP2_Ct-PDT_like 117 298 - -
Lan6g2035 417 ProSitePatterns Prephenate dehydratase signature 1. 272 294 IPR018528 GO:0004664|GO:0009094
Lan6g2035 417 SUPERFAMILY ACT-like 291 403 IPR045865 -
Lan6g2035 417 Pfam Prephenate dehydratase 120 298 IPR001086 GO:0004664|GO:0009094
Lan6g2035 417 Gene3D - 203 284 - -
Lan6g2035 417 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 31 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2035 Lan-Chr6 31099080 31100523 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2035 K05359 - gmx:100797636 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2035 6 31099080 31100523 Lan3g0119 3 824572 826062 LSH
Lan6g2035 6 31099080 31100523 Lan7g0345 7 2368048 2369680 PCT
Lan7g0345 7 2368048 2369680 Lan6g2035 6 31099080 31100523 PCT