Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0338 ATGGTGCCCATTTTTTTGTTCTCCTTGGCACTCTTTGCGTTGGTTTCTGGGTCTCCCATGACTTTGAGACTTGAAAGATCATTTCCTTCAAATCATGGAATGGAGTTGAATCAGCTGAGAGCGTGGGACATGGACAGACATCGAAGGATGTTACAGTCCACTAACTATATTGTCGATTTCCCAGTTAAAGGAACCTTTGATCCATCTACAGTTGGGCTTTACTATACGAAGATTCTATTGGGTTCACCTCCAAGAGAATTCCATGTACAGATTGACACTGGTAGTGATGTTCTGTGGGTTAGTTGCGGTTCTTGCAATGGTTGTCCCCAAACAAGCGGGCTTGAAATTCAACTCAATTATTTTGACCCTGGGAGTTCATCAACATCTTCATTGATATCTTGTTTAGACCAAAGGTGCAGGAATGGAGTGCAGTCTCAAGATGCCATATGTTCCAGCCAGAACAACCAGTGCACCTACACTTTCCAGTATGGAGATGGTAGCGGTACATCAGGGTACTATGTTTCAGACTTGATGCATTTTGCTAGTATTTCAGAGGGATCCGTGACATCAAATTATTCTGCCCCAGTAGTTTTTGGTTGTAGCAACCTGCAGACGGGAGACTTGACAAAGACCGTAAGAGCAGTTGATGGGATATTTGGATTTGGGCAACAGGACATGTCTGTTATCTCACAGCTCTACTCACAAGGAATAGCGCCAAAAGTGTTCTCTCATTGCCTCAAAGGAGATAATAGTGGTGGGGGCATATTGGTTCTTGGTGAGATTGTGGAGCCAAATATGATTTATAGTCCACTTGTTCCATCACAGCCTCATTACAATTTAAATCTACAGAGCATCTCTGTCAATGGCCAAACATTGCAAATTGATCCTTCAATTTTTGAAACATCAAACAACAGAGGTACCATAGTTGATTCTGGAACGACGTTGGCATACCTTGCAGAAGAAGCCTATGATCCCTTTATTGATGCGATCACAGCTGCAATTCCACAATCTATACGCACAGTTCTTTCCAAGGGAAATCAGTGTTACTTGATATCCACTAGTGTCGCCAACATTTTTCCTCAAGTAAGTCTGAACTTTGCTGATGGTGCATCTCTAGTTTTGAGACCTCAAGACTACCTTATACAGGAGAATCCTATTGTTGATGGAGCAGTGTGGTGTCTTGGCTTTCAGAAAATCCAGGGTCAAGATATAACAATTCTAGGAGACCTTGTATTAAAAGACAAAATCTTTGTCTATGATCTTGCTGGTCAGAGAATTGGATGGACTAATTATGATTGTTCATTGTCGGTTAATGTCTCTGCATCAACTGGTACGGGCAGAAGTGAATTCGTCAATGCTGGAGAACTAAATGGCAGTACTTCTTTACGCGATAGAACTCACAAGTTCACTAAAGCACAGGTCCTGGCATTTTTGATGCACATGACATTGATTTGCTGCTTTGTATTTTTGTAG 1473 0.4182 MVPIFLFSLALFALVSGSPMTLRLERSFPSNHGMELNQLRAWDMDRHRRMLQSTNYIVDFPVKGTFDPSTVGLYYTKILLGSPPREFHVQIDTGSDVLWVSCGSCNGCPQTSGLEIQLNYFDPGSSSTSSLISCLDQRCRNGVQSQDAICSSQNNQCTYTFQYGDGSGTSGYYVSDLMHFASISEGSVTSNYSAPVVFGCSNLQTGDLTKTVRAVDGIFGFGQQDMSVISQLYSQGIAPKVFSHCLKGDNSGGGILVLGEIVEPNMIYSPLVPSQPHYNLNLQSISVNGQTLQIDPSIFETSNNRGTIVDSGTTLAYLAEEAYDPFIDAITAAIPQSIRTVLSKGNQCYLISTSVANIFPQVSLNFADGASLVLRPQDYLIQENPIVDGAVWCLGFQKIQGQDITILGDLVLKDKIFVYDLAGQRIGWTNYDCSLSVNVSASTGTGRSEFVNAGELNGSTSLRDRTHKFTKAQVLAFLMHMTLICCFVFL* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0338 490 Pfam Xylanase inhibitor N-terminal 74 259 IPR032861 -
Lan7g0338 490 Gene3D Acid Proteases 261 440 IPR021109 -
Lan7g0338 490 CDD pepsin_A_like_plant 74 433 IPR034161 -
Lan7g0338 490 SUPERFAMILY Acid proteases 71 436 IPR021109 -
Lan7g0338 490 Pfam Xylanase inhibitor C-terminal 277 429 IPR032799 -
Lan7g0338 490 Gene3D Acid Proteases 49 260 IPR021109 -
Lan7g0338 490 PANTHER ASPARTYL PROTEASES 3 450 IPR001461 GO:0004190|GO:0006508
Lan7g0338 490 PRINTS Pepsin (A1) aspartic protease family signature 80 100 IPR001461 GO:0004190|GO:0006508
Lan7g0338 490 PRINTS Pepsin (A1) aspartic protease family signature 307 318 IPR001461 GO:0004190|GO:0006508
Lan7g0338 490 PRINTS Pepsin (A1) aspartic protease family signature 405 420 IPR001461 GO:0004190|GO:0006508
Lan7g0338 490 ProSiteProfiles Peptidase family A1 domain profile. 74 429 IPR033121 -
Lan7g0338 490 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 3 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0338 Lan-Chr7 2310166 2314657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0338 48 434 Miscellaneous Gene Families AT1G44130 27.160 1.78e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0338 - K00924 gmx:100811632 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2028 6 31015252 31020437 Lan7g0338 7 2310166 2314657 PCT
Lan3g0104 3 730387 735516 Lan7g0338 7 2310166 2314657 PCT
Lan7g0338 7 2310166 2314657 Lan6g2028 6 31015252 31020437 PCT
Lan7g0338 7 2310166 2314657 Lan3g0104 3 730387 735516 PCT