Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0298 ATGCTAAGTCATAAGCGACACGTCGTTTTGTTCTCCCTCATCACTCTTCTCTTCATCTCTTCCTTCTCTCTCTCTTTCTCCCTCCCAAACGACAACGACGATGACGAAGATCTCAGTTTCCTCGACGAACCTGATGACGTCACCACCTCACACCACCCAGATCTCGATCACTTCGACGACGAGGAAGAAGAAGAAGAAGACGCCGCCGACGAAGATTTCGACGATTTCTCCGCCTTCGACCACCCCGCAAGCCATGAGGAAGAAGAACCTACATTCGACGACAAACACGTCGTCGTATTGATAGAGCGCAATTTCACCACTATCGTTGAGAATAACCGCTTCGTGTTGGTCGAATTCTACGCTCCGTGGTGCGGCCATTGCAAGTCCCTGGCGCCGGAGTATGCTGCCGCTGCAACCGATTTGGAATCCGACGACGTCGTTTTGGCCAAGGTAGATGCCACGGAGGAGCAGGAATTGGCACATGAATATGATGTTAAGGGTTTTCCCACTGTGTTCTTCTTCATCGATGGAGTTCACAAGCCTTACACTGGTGGCAGAACCAAAGATGCAATAGTGAGCTGGATTAGGAAGAAGATAGGACCTGGTGTAGTCAACATAACTACGTTGGACGATGCTGAGCGAGTTTTGACCTCTGAAAACAAACTTGTTTTGGCCTTCCTTGATTCTCTAGTGGGTGCTGATAGTGAGGAGCTGGCTAATGCATCAAAACTTGAGGATGATGTCAATTTTTATCAAACAGTGAACCCTGATGTGGCAAAACTTTTCCATATTGACCCAAATTCCAAACGCCCTGCTTTGGTCTTGCTCAAGAAAGAGGAGGACAAGATCAACCATTTTGATGGCCAATATGTAAAATCTGCAATAGCAGACTTTGTATCTTCCAACAAGCTTCCTTTGGTTACAACTTTTACAAGAGAGAATGCCCCATCAATCTTTGAAAGTCAAATCAAGAAACAGTTGTTGCTGTTTGTCACTAAAAAGGATTCAGAGAAGTTTGTTCCAATATTTCAAGAAGTAGCAAAAGTTTTCAAGGGGAAGCTGATCTTTGTTCATGTGGAAATGGATAATGAAGATGTTGGTAAGCCAGTTGCAGATTATTTTGGTATCACTGGGAGTGATCCAAAGGTACTTGCATTCGCAGGAAATGATGATGGAAGAAAATTTGTGTTTGATGAAGAGGTTTCTGTTGACAAACTTAAGGCATTTGGGAAAGATTTCCTTGAAGACATGTTAAAACCTTTCTTGAAGTCAGATCCAGTTCCTGAAAGTAATGATGGTGATGTGAAAATTGTTGTTGGGGATAACTTTGATCAAATTGTCTTGGACGAGTCGAAAGACGTCCTGCTTGAGATTTATGCTCCGTGGTGTGGCCACTGTGAAGCTCTGGAACCAACATACAACAAGCTTGCCAAACATCTCCGCGGCATTGAGTCTATTGTAATAGCCAAGATGGACGGAACAACTAATGAGCATCCCAGGGCAAAGGCTGATGGATTCCCAACTCTTCTCTTCTTTCCAGCAGGAAAGAAGAGTTCTGACCCTATTACTGTTGATGCGGATCGTACAGTGGTAGCCTTTTATAAGTTTCTGAAGAAGCATGCATCAATCCCGTTCAAGCTTGAGAAACCAACATCAACTTCTAAGCTTGAGAGTTCTGATGTGAAGGAGAGTCAGAGTAGCAGTACCGACCTGAAGGATGAATTATGA 1728 0.4427 MLSHKRHVVLFSLITLLFISSFSLSFSLPNDNDDDEDLSFLDEPDDVTTSHHPDLDHFDDEEEEEEDAADEDFDDFSAFDHPASHEEEEPTFDDKHVVVLIERNFTTIVENNRFVLVEFYAPWCGHCKSLAPEYAAAATDLESDDVVLAKVDATEEQELAHEYDVKGFPTVFFFIDGVHKPYTGGRTKDAIVSWIRKKIGPGVVNITTLDDAERVLTSENKLVLAFLDSLVGADSEELANASKLEDDVNFYQTVNPDVAKLFHIDPNSKRPALVLLKKEEDKINHFDGQYVKSAIADFVSSNKLPLVTTFTRENAPSIFESQIKKQLLLFVTKKDSEKFVPIFQEVAKVFKGKLIFVHVEMDNEDVGKPVADYFGITGSDPKVLAFAGNDDGRKFVFDEEVSVDKLKAFGKDFLEDMLKPFLKSDPVPESNDGDVKIVVGDNFDQIVLDESKDVLLEIYAPWCGHCEALEPTYNKLAKHLRGIESIVIAKMDGTTNEHPRAKADGFPTLLFFPAGKKSSDPITVDADRTVVAFYKFLKKHASIPFKLEKPTSTSKLESSDVKESQSSSTDLKDEL* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0298 575 ProSitePatterns Thioredoxin family active site. 116 134 IPR017937 -
Lan7g0298 575 SUPERFAMILY Thioredoxin-like 431 542 IPR036249 -
Lan7g0298 575 Gene3D Glutaredoxin 87 199 - -
Lan7g0298 575 PANTHER PROTEIN DISULFIDE-ISOMERASE 2 565 - -
Lan7g0298 575 SUPERFAMILY Thioredoxin-like 302 432 IPR036249 -
Lan7g0298 575 ProSiteProfiles Thioredoxin domain profile. 77 200 IPR013766 -
Lan7g0298 575 ProSitePatterns Thioredoxin family active site. 455 473 IPR017937 -
Lan7g0298 575 SUPERFAMILY Thioredoxin-like 203 314 IPR036249 -
Lan7g0298 575 ProSiteProfiles Thioredoxin domain profile. 421 542 IPR013766 -
Lan7g0298 575 CDD PDI_b_family 203 302 - -
Lan7g0298 575 Pfam Thioredoxin-like domain 239 411 - -
Lan7g0298 575 TIGRFAM pdi_dom: protein disulfide-isomerase domain 101 198 IPR005788 GO:0003756
Lan7g0298 575 Gene3D Glutaredoxin 200 303 - -
Lan7g0298 575 PRINTS Thioredoxin family signature 115 123 - -
Lan7g0298 575 PRINTS Thioredoxin family signature 123 132 - -
Lan7g0298 575 PRINTS Thioredoxin family signature 164 175 - -
Lan7g0298 575 SUPERFAMILY Thioredoxin-like 90 200 IPR036249 -
Lan7g0298 575 TIGRFAM ER_PDI_fam: protein disulfide isomerase 96 575 IPR005792 GO:0003756
Lan7g0298 575 MobiDBLite consensus disorder prediction 35 70 - -
Lan7g0298 575 CDD PDI_b'_family 314 414 - -
Lan7g0298 575 PANTHER PROTEIN DISULFIDE ISOMERASE 2 565 - -
Lan7g0298 575 CDD PDI_a_PDI_a'_C 435 537 - -
Lan7g0298 575 Gene3D Glutaredoxin 429 543 - -
Lan7g0298 575 CDD PDI_a_family 98 195 - -
Lan7g0298 575 MobiDBLite consensus disorder prediction 551 575 - -
Lan7g0298 575 Pfam Thioredoxin 435 520 IPR013766 -
Lan7g0298 575 Pfam Thioredoxin 97 197 IPR013766 -
Lan7g0298 575 Gene3D Glutaredoxin 304 428 - -
Lan7g0298 575 MobiDBLite consensus disorder prediction 551 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0298 Lan-Chr7 1914193 1918713 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0298 K09580 - gmx:100785630 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0298 7 1914193 1918713 Lan7g0298 7 1914193 1918713 ECH
Lan6g1940 6 30371096 30375090 Lan7g0298 7 1914193 1918713 PCT
Lan10g0134 10 827682 832365 Lan7g0298 7 1914193 1918713 PCT
Lan7g0298 7 1914193 1918713 Lan6g1940 6 30371096 30375090 PCT
Lan7g0298 7 1914193 1918713 Lan10g0134 10 827682 832365 PCT