Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1940 ATGAGAACCTTTCTCTTCCTTTCTCTCACAACCCTTCTTCTCTTCTCTTCCTTCTCTCTCATTTCCTCTACCACCGAAGACGAACTCGAAGATCTCACCTTCCTCCAAGACTCCGATCAAACTTCCGATTCCGACCACCACCACCACTTCGACGACGAAGACGACAACCTCGATGACTCCTCCTCCGTTTCCGATCCTGAAATCGATGAAAAGGACGTCGTCGTTTTGAATCAGAAGAACTTCAGTGACGTCATCAACAATAACCGTTTCGTGTTGGTTGAATTCTACGCGCCTTGGTGCGGTCACTGTAAGGCATTGGCTCCTGAATATGCAGAAGCTGCTACTGAATTGAAGGGCAAAGGTGTAATTTTAGCGAAGGTTGATGCTTCTGAAGAAAATGAATTGGCACAGGAGTATGATATTCAAGGATTTCCTACTATCTATTTATTCATCGATGGGATTCATAAACTCTACAATGGCAATAGGAACAAAGATGCTATAGTGAGTTGGATTAAGAAGAAGACAGGGCCTGGTATTCACAATGTAACTAGTTTGGATGATGCTGAAACCATTTTGACCTCTCAATCCAAACTTGTTTTGGCTTTCCTCAACTCTTTAGTTGGCCCTGAGAGTGATGAGCTAGCTGCCGCTTCAAGGCTTGAGGATGATGTCAATTTTTATCAAACTGTGAATCCTGATGTGGCGAAGCTTTTCCATATTGATCCCGATGTTAAACGCCCAGCTTTGATCCTGATCAAGAAAGAGGACGAAAAACTCAACCATTTTGATGGCCAATTTGCGAAGTCTGAAATAGCAAACTTTGTAACCTCCAACAAGCTTCCTTTGGTAACAGTTTTCACAAGAGAGGGTGCTCCAGCAATATTTGAAAATCCAATCAAGAAACAGTTGTTGCTGTTTGCAACTTCAAATGATTCAGAGAAGCTGATCCCAGTATTTCGAGAAGCAGCAAAATCTTTCAAGGGGAAGCTGATCTTTATATATGTGGAATTGGACAATGAAGATTTTGGAAAGCCTGTTTCGGAGTACTTTGGTATCAGTGGGAATGCTCCAAAAGTACTTGCATACACTGGAAATGAAGATGGAAAAAAATTTGTGCATGATGAGGAGGTGACTGTTGACAACATAAAGGTATTTGGGGAAAATTTCTTTGAAGACAAGTTAAAGCCTTTCTTCAAGTCAGATCCAGTTCCTGAAAGTAATGATGGTGACGTGAAAATAGTTGTTGGGAATAACTTTGATGAAATTGTCTTGGATGAGTCAAAGGATGTTCTCCTCGAGATTTATGCTCCGTGGTGTGGACATTGCCAAGCACTGGAACCAATATATGACAAGCTTGCAAAACATCTTCGCAGTATTGACTCTATTGTGATAGCCAAAATGGATGGAACAACAAATGAGCACCCTAGGGCAAAGCCTGATGGATTCCCCACTCTTCTCTTCTTCCCAGCAGGAAACAAGAGTTTTGACCCGATTACTGTTGATACCGATCGTACAGTGGTGGCTTTTTATAAGTTCCTCAAGAAAAATGCATCAATCCCATTCAAGCTCAAGAAACCAACCTCAACTTCTAAACCGCCAAGTTCTGATGCCAAGGAGAGTGCTGATGCTAAGGAGAGCCAGAGCAGCAATGTTGATGTGAAGGATGAATTATGA 1674 0.42 MRTFLFLSLTTLLLFSSFSLISSTTEDELEDLTFLQDSDQTSDSDHHHHFDDEDDNLDDSSSVSDPEIDEKDVVVLNQKNFSDVINNNRFVLVEFYAPWCGHCKALAPEYAEAATELKGKGVILAKVDASEENELAQEYDIQGFPTIYLFIDGIHKLYNGNRNKDAIVSWIKKKTGPGIHNVTSLDDAETILTSQSKLVLAFLNSLVGPESDELAAASRLEDDVNFYQTVNPDVAKLFHIDPDVKRPALILIKKEDEKLNHFDGQFAKSEIANFVTSNKLPLVTVFTREGAPAIFENPIKKQLLLFATSNDSEKLIPVFREAAKSFKGKLIFIYVELDNEDFGKPVSEYFGISGNAPKVLAYTGNEDGKKFVHDEEVTVDNIKVFGENFFEDKLKPFFKSDPVPESNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQALEPIYDKLAKHLRSIDSIVIAKMDGTTNEHPRAKPDGFPTLLFFPAGNKSFDPITVDTDRTVVAFYKFLKKNASIPFKLKKPTSTSKPPSSDAKESADAKESQSSNVDVKDEL* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1940 557 MobiDBLite consensus disorder prediction 537 557 - -
Lan6g1940 557 MobiDBLite consensus disorder prediction 38 65 - -
Lan6g1940 557 PANTHER PROTEIN DISULFIDE ISOMERASE 53 537 - -
Lan6g1940 557 TIGRFAM ER_PDI_fam: protein disulfide isomerase 71 557 IPR005792 GO:0003756
Lan6g1940 557 Gene3D Glutaredoxin 280 404 - -
Lan6g1940 557 ProSitePatterns Thioredoxin family active site. 431 449 IPR017937 -
Lan6g1940 557 CDD PDI_b_family 179 278 - -
Lan6g1940 557 SUPERFAMILY Thioredoxin-like 182 289 IPR036249 -
Lan6g1940 557 ProSitePatterns Thioredoxin family active site. 92 110 IPR017937 -
Lan6g1940 557 ProSiteProfiles Thioredoxin domain profile. 389 518 IPR013766 -
Lan6g1940 557 TIGRFAM pdi_dom: protein disulfide-isomerase domain 76 174 IPR005788 GO:0003756
Lan6g1940 557 Gene3D Glutaredoxin 405 519 - -
Lan6g1940 557 Pfam Thioredoxin-like domain 215 385 - -
Lan6g1940 557 PANTHER PROTEIN DISULFIDE-ISOMERASE 53 537 - -
Lan6g1940 557 MobiDBLite consensus disorder prediction 523 557 - -
Lan6g1940 557 CDD PDI_b'_family 290 390 - -
Lan6g1940 557 SUPERFAMILY Thioredoxin-like 278 408 IPR036249 -
Lan6g1940 557 Gene3D Glutaredoxin 177 279 - -
Lan6g1940 557 MobiDBLite consensus disorder prediction 40 55 - -
Lan6g1940 557 Pfam Thioredoxin 411 496 IPR013766 -
Lan6g1940 557 Pfam Thioredoxin 73 173 IPR013766 -
Lan6g1940 557 Gene3D Glutaredoxin 66 176 - -
Lan6g1940 557 CDD PDI_a_PDI_a'_C 411 513 - -
Lan6g1940 557 ProSiteProfiles Thioredoxin domain profile. 54 176 IPR013766 -
Lan6g1940 557 CDD PDI_a_family 74 171 - -
Lan6g1940 557 PRINTS Thioredoxin family signature 91 99 - -
Lan6g1940 557 PRINTS Thioredoxin family signature 99 108 - -
Lan6g1940 557 PRINTS Thioredoxin family signature 140 151 - -
Lan6g1940 557 SUPERFAMILY Thioredoxin-like 67 176 IPR036249 -
Lan6g1940 557 SUPERFAMILY Thioredoxin-like 407 518 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1940 Lan-Chr6 30371096 30375090 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1940 K09580 - gmx:100170706 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1940 6 30371096 30375090 Lan10g0134 10 827682 832365 LSH
Lan6g1940 6 30371096 30375090 Lan7g0298 7 1914193 1918713 PCT
Lan7g0298 7 1914193 1918713 Lan6g1940 6 30371096 30375090 PCT