Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0189 ATGGCTTCTCTTCCCGCCACCGGTAACGGTCTCATCGTCAGCTTCGGCGAGATGCTCATCGACTTCGTCCCCACCACCTCCGGCGTCTCCCTCGCCCAAGCTCCTGGCTTCCTCAAGGCTCCCGGTGGCGCCCCTGCTAACGTCGCAATCGCCGTCACTCGCCTCGGCGGAAAAGCTGCATTCGTCGGAAAACTCGGTGATGATGAGTTCGGACACATGCTCGCTGGGATCTTGAAGGAGAATAACGTCAACGCTGACGGTATCACTTTTGATCAGGGCGCACGCACTGCACTGGCCTTCGTGACGCTACGCGCCGACGGAGAGCGTGAGTTCATGTTCTACAGAAACCCCAGCGCCGATATGCTCCTCAAGCCAGAAGATCTTAATCTTGAACTCATAAGATCCGCTAAAGTATTCCATTATGGATCGATAAGCTTGATAGTGGAGCCATGCAGATCAGCACACCTGAAGGCATTGGAAGTGGCCAAGGAGGCAGGGAGCCTACTCTCTTATGATCCAAACCTCCGGTTACCCTTATGGCCCTCACCCGAGGAAGCCCGTCAGCAAATGCTCAGCATATGGGACAAGGCTGATATCATCAAGGTCAGTGATGTCGAGCTCGAATTCCTCACCGGCAAAGTTGATGATGCTTCTGCTCTCTCCTTGTGGCATCCCAATTTGAAGTTACTCCTTGTCACTCTTGGTGAACAAGGTTCCAAATACTATACCAAGAATTTCCATGGATCAGTGGATGCTTTTCATGTTAACACAGTGGATACAACTGGCGCGGGTGATTCCTTTGTTGGTGCTCTACTGTCCAAGATTGTTGATGATCAATCCATACTTGAAGATGAACCAAGGTTAAGGGAAGTACTCAAGTTTGCAAATGCATCTGGAGCAATTACAACTACTAAAAAGGGAGCAATCCCTGCTCTTCCAACAGAGTCTGATGTCCTCAACCTGATCAAAGGAGCATAG 978 0.5082 MASLPATGNGLIVSFGEMLIDFVPTTSGVSLAQAPGFLKAPGGAPANVAIAVTRLGGKAAFVGKLGDDEFGHMLAGILKENNVNADGITFDQGARTALAFVTLRADGEREFMFYRNPSADMLLKPEDLNLELIRSAKVFHYGSISLIVEPCRSAHLKALEVAKEAGSLLSYDPNLRLPLWPSPEEARQQMLSIWDKADIIKVSDVELEFLTGKVDDASALSLWHPNLKLLLVTLGEQGSKYYTKNFHGSVDAFHVNTVDTTGAGDSFVGALLSKIVDDQSILEDEPRLREVLKFANASGAITTTKKGAIPALPTESDVLNLIKGA* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0189 325 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 259 272 IPR002173 GO:0016773
Lan7g0189 325 Pfam pfkB family carbohydrate kinase 11 314 IPR011611 -
Lan7g0189 325 SUPERFAMILY Ribokinase-like 12 322 IPR029056 -
Lan7g0189 325 PANTHER BNAA04G18320D PROTEIN 18 324 - -
Lan7g0189 325 PRINTS Ribokinase signature 37 56 IPR002139 GO:0016301
Lan7g0189 325 PRINTS Ribokinase signature 192 207 IPR002139 GO:0016301
Lan7g0189 325 PRINTS Ribokinase signature 230 241 IPR002139 GO:0016301
Lan7g0189 325 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 42 66 IPR002173 GO:0016773
Lan7g0189 325 PANTHER HEXOKINASE FAMILY MEMBER 18 324 - -
Lan7g0189 325 Gene3D - 10 325 IPR029056 -
Lan7g0189 325 CDD bac_FRK 11 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0189 Lan-Chr7 1153194 1156840 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0189 K00847 - gmx:100780082 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0189 7 1153194 1156840 Lan13g0278 13 1770359 1773841 LSH
Lan3g0252 3 1630763 1635342 Lan7g0189 7 1153194 1156840 PCT
Lan7g0189 7 1153194 1156840 Lan3g0252 3 1630763 1635342 PCT