Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0252 ATGGCTTTGAACAATGCTTTCCCCGCTACCGGCACCGGTCTCATCGTCAGCTTCGGTGAGATGCTCATCGACTTCGTCCCCACCGTCTCCGGCGTCTCCCTAGCTGAGGCACCAGGATTCCTCAAAGCTCCCGGCGGTGCTCCGGCGAACGTTGCCATCGCCGTCGCAAGGATCGGTGGCAAAGCTGCCTTCGTCGGAAAACTCGGAGACGATGAGTTCGGTCACATGCTGGCGGGGATCTTGAAGGAAAACGGCGTACGCGCCGATGGTATTACATTTGATACGGGTGCACGTACTGCTTTGGCGTTCGTGACTCTACGCGCTGACGGGGAGCGTGAGTTTATGTTCTATAGGAACCCGAGTGCTGACATGTTGCTTAAGCCTGAAGAGCTTAACCTTGAACTCATCAGATCTGCAAAAGTTTTCCACTATGGATCAATAAGTTTGATAGTGGAGCCATGCAGATCAGCACACTTGAAAGCCATGGAAGTTGCGAAAGAAGCTGGTTGTCTCCTCTCCTATGATCCAAATCTGCGCCTACCATTGTGGCCATCACCTGAAGAAGCTCGTAAACAAATACTCAGTATATGGGAAAAAGCAGATTTAATCAAAGTCAGTGATGTGGAGCTTGAATTCCTCACTGGAAGTGACAAAATTGATGATGCTTCTGCTTTGTCTTTGTGGCACCCCAACTTGAAGTTACTCCTTGTCACTGTTGGTGAACATGGTTCTAAATACTATACCAAGAATTTCCATGGATCAGTAGATGCTTTTCATGTCAAGACAATTGATACAACAGGTGCTGGTGATTCCTTTGTTGGTTCTCTATTGGCCAAGATTGTTGATGATCAATCCATACTTGAAGATGAACCAAGGTTAAGAGAGGTGCTCAAGTTTGCAAATGCATGTGGAGCAATTACAACTACTAAAAAGGGAGCAATCCCTGCTCTTCCCAAAGAGGAAGATGTGTTCAACCTGATCAAAGAGTCATCAGCATAA 999 0.4735 MALNNAFPATGTGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVARIGGKAAFVGKLGDDEFGHMLAGILKENGVRADGITFDTGARTALAFVTLRADGEREFMFYRNPSADMLLKPEELNLELIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGCLLSYDPNLRLPLWPSPEEARKQILSIWEKADLIKVSDVELEFLTGSDKIDDASALSLWHPNLKLLLVTVGEHGSKYYTKNFHGSVDAFHVKTIDTTGAGDSFVGSLLAKIVDDQSILEDEPRLREVLKFANACGAITTTKKGAIPALPKEEDVFNLIKESSA* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0252 332 Gene3D - 13 332 IPR029056 -
Lan3g0252 332 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 45 69 IPR002173 GO:0016773
Lan3g0252 332 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Lan3g0252 332 PRINTS Ribokinase signature 195 210 IPR002139 GO:0016301
Lan3g0252 332 PRINTS Ribokinase signature 235 246 IPR002139 GO:0016301
Lan3g0252 332 PANTHER BNAA04G18320D PROTEIN 20 323 - -
Lan3g0252 332 PANTHER HEXOKINASE FAMILY MEMBER 20 323 - -
Lan3g0252 332 SUPERFAMILY Ribokinase-like 15 327 IPR029056 -
Lan3g0252 332 Pfam pfkB family carbohydrate kinase 14 319 IPR011611 -
Lan3g0252 332 CDD bac_FRK 14 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0252 Lan-Chr3 1630763 1635342 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0252 K00847 - gmx:100803713 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g0252 3 1630763 1635342 Lan7g0189 7 1153194 1156840 PCT
Lan3g0252 3 1630763 1635342 Lan13g0278 13 1770359 1773841 PCT
Lan7g0189 7 1153194 1156840 Lan3g0252 3 1630763 1635342 PCT
Lan13g0278 13 1770359 1773841 Lan3g0252 3 1630763 1635342 PCT