Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0278 ATGGCTTCCACCACCGGTAACGGCCTCATCGTCAGCTTCGGCGAGATGCTCATCGACTTCGTCCCCACCACCTCCGGCGTCTCCCTCGCTGAGGCTCCTGGCTTCCTCAAAGCTCCCGGCGGTGCACCTGCTAACGTGGCCATCGCCGTGGCTCGCCTCGGTGGCAAAGCCGCCTTCGTTGGAAAACTCGGTGATGATGAGTTCGGCCACATGCTCGCCGGGATCTTGAAGGAGAACAACGTCAATGCCGATGGCATTACCTTCGATCAAGGCGCACGCACTGCCCTAGCTTTCGTGACACTACGCGCCGACGGAGAGCGTGAGTTCATGTTCTATCGAAACCCAAGTGCTGATATGTTACTCACGCCTCAAGATCTCAATCTTCAACTCATTAGATCTGCAAAAATATTCCATTATGGATCCATAAGCTTGATAGTGGAGCCATCTAGATCGGCACACTTGAAGGCATTGGAAGTGGCCAAGGAGGCAGGGTCCCTACTCTCTTATGATCCAAACCTCCGGTTACCCTTATGGCCCTCACCCGAGGAAGCTCGTGAGCAAATTCTCAGCATATGGGACAAGGCTGATATCATCAAGATCAGTGATGTGGAGCTTGAATTCCTTACTGGAAAAGTTGATGATGCTTCTGCTCTCTCCTTGTGGCACCCCAACTTGAAGTTACTTCTTGTCACTCTTGGTGAAGATGGTTCCAAATACTATACCAAGAATTTCAATGGATCAGTGGATGCTTTTCATGTTAATACAGTGGATACAACTGGCGCGGGTGATTCCTTTATTGGTGCTCTACTATCGAAGATCGTTGATGATCAAACCATACTTGAAGATGAACCAAGGTTAAGGGAAGTACTGAAGTTTGCAAATGCAACTGGAGCAATTACAACTACTAAGAAGGGAGCAATCCCTGCTCTTCCCACAGAGCCTGATGTCCTCAACCTGATTCAAAAAGCATAA 972 0.4949 MASTTGNGLIVSFGEMLIDFVPTTSGVSLAEAPGFLKAPGGAPANVAIAVARLGGKAAFVGKLGDDEFGHMLAGILKENNVNADGITFDQGARTALAFVTLRADGEREFMFYRNPSADMLLTPQDLNLQLIRSAKIFHYGSISLIVEPSRSAHLKALEVAKEAGSLLSYDPNLRLPLWPSPEEAREQILSIWDKADIIKISDVELEFLTGKVDDASALSLWHPNLKLLLVTLGEDGSKYYTKNFNGSVDAFHVNTVDTTGAGDSFIGALLSKIVDDQTILEDEPRLREVLKFANATGAITTTKKGAIPALPTEPDVLNLIQKA* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0278 323 PRINTS Ribokinase signature 35 54 IPR002139 GO:0016301
Lan13g0278 323 PRINTS Ribokinase signature 228 239 IPR002139 GO:0016301
Lan13g0278 323 PANTHER BNAA04G18320D PROTEIN 16 318 - -
Lan13g0278 323 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 40 64 IPR002173 GO:0016773
Lan13g0278 323 Gene3D - 8 323 IPR029056 -
Lan13g0278 323 PANTHER HEXOKINASE FAMILY MEMBER 16 318 - -
Lan13g0278 323 Pfam pfkB family carbohydrate kinase 9 312 IPR011611 -
Lan13g0278 323 SUPERFAMILY Ribokinase-like 10 320 IPR029056 -
Lan13g0278 323 CDD bac_FRK 9 307 - -
Lan13g0278 323 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 257 270 IPR002173 GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0278 Lan-Chr13 1770359 1773841 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0278 K00847 - gmx:100780082 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0189 7 1153194 1156840 Lan13g0278 13 1770359 1773841 LSH
Lan3g0252 3 1630763 1635342 Lan13g0278 13 1770359 1773841 PCT
Lan13g0278 13 1770359 1773841 Lan3g0252 3 1630763 1635342 PCT