Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0098 ACAGGTTTTGAAGCTGAAGCTTTGTCTTATGATTACAGTGCTACCATTGAATGTTTGGCACAACCTCAGAAGCCTCAGTATTATGGAGGAATCATTCAGAATCCGGAACTGAACAATGGACTACAAGGTTGGACTTCATTTGGGAATGCAACAATAGAACATAGACAATCATTGGGTAACAAATATGTTGTAGCACATACCAGAAAACAACCTCATGATAGTGTCTCTCAGAAGATTTACTTACAAAAGGACATGCATTATGTTTTATCTGCTTGGATACAAGTGAGTGAGGGAAATGTTCCAGTAACAGCAGTTGTGAAAACAAGTAAAGGATTCATACATGCTGGTGCTACTGTTGCTGACTCAAATTGCTGGTCTATGCTTAAGGGTGGACTTACAGCAGATAAATCAGGTCCAGCTGAGCTTTATTTTGAGAGCAAAAATACTTCAATAGAAATATGGATGGACAACATTTCCTTACAACCATTCACAGAAAAGCAATGGAGGTCTCATCAATATCAGAGCATTGAGAAGGCACGCAAGAGGAAAGTATTAGTGAAAGCAGTTGATGAACAAGGAAATCCTTTACCAAATGCAACTATATCTATCACACAAACAAATTCAGCTTTTCCTATTGGAAGTGCCATAAACAAGAACATTGTGAACAATAGTGCATACCAAAATTGGTTCACATCCAGGTTCACAGTTGCTACATTTGAAAATGAAATGAAGTGGGCTAGCACCGAATATTCGCAGGGCAATGAGGACTACTCTGTTGCCGATGCTATGCTAAAATTTGCGAAGGACCATAACATTCGAGTTCGAGGACACAATATATTTTGGAATGATCCTAATTACCAATCTAGTTGGCTTTCTGCACTCTCCCCAGACCAGCTTAAATCAGCAGTTGATAAAAGGATTCAATCTGTTGTTTCAAGATACAAGGACCAACTTATTGGATGGGATGTTGTTAACGAAAACCTCCACTTTTCATTCTTCGAAAGTAAACTTGGACAAGATTTTTCAGCCAGGGTGTTCAACAAGGTTAACAAAATTGACCCAACACAGACTTTATTCCTGAATGAATACAATACCATTGAGGATAGTAGAGACAGTGCAGTAAACCCAACAAAATATATAAAGAAGATCCAACAGATCAAAAACTATCCTGGAAGTGCATCATTGCCACTCGGGATCGGGCTCGAGTCTCATTTCCCTAATAGTCCTCCTAACCTTCCTTACATGAGATCTTCCATTGATACCCTTGCCTCTGCAGGTTATCCAATTTGGATTACAGAAATAGATGTTGCAGACCAACCGAACCAGGCACAGTACTTTGAGCAGGTTCTAAGAGAAGCACACTCTCATCCAAAGGTACAAGGCATTGTAATGTGGACAGCATGGTCACCAAATGGTAATTGCTATAGAATTTGCTTAGTTGATAGTAATTTCAACAACTTGGCTGGAGGGGAAGTTTTGGACAAATTGCTTAGTGAATGGGGACTCAAAAAATTGTCAGGGACTACAGATCAAAATGGATTCCTTAAGACCTCACTTTTTCATGGTGATTACCAAGTACAAATCAATCACCCTTCTAAGAAGAATTACAACCTCTCTAGGCACCTGAAAGTGATTCCAAATGATGAGTCCAAGAGAACATCACAATTTGTACAGTTTTCTATGTAG 1686 0.3915 TGFEAEALSYDYSATIECLAQPQKPQYYGGIIQNPELNNGLQGWTSFGNATIEHRQSLGNKYVVAHTRKQPHDSVSQKIYLQKDMHYVLSAWIQVSEGNVPVTAVVKTSKGFIHAGATVADSNCWSMLKGGLTADKSGPAELYFESKNTSIEIWMDNISLQPFTEKQWRSHQYQSIEKARKRKVLVKAVDEQGNPLPNATISITQTNSAFPIGSAINKNIVNNSAYQNWFTSRFTVATFENEMKWASTEYSQGNEDYSVADAMLKFAKDHNIRVRGHNIFWNDPNYQSSWLSALSPDQLKSAVDKRIQSVVSRYKDQLIGWDVVNENLHFSFFESKLGQDFSARVFNKVNKIDPTQTLFLNEYNTIEDSRDSAVNPTKYIKKIQQIKNYPGSASLPLGIGLESHFPNSPPNLPYMRSSIDTLASAGYPIWITEIDVADQPNQAQYFEQVLREAHSHPKVQGIVMWTAWSPNGNCYRICLVDSNFNNLAGGEVLDKLLSEWGLKKLSGTTDQNGFLKTSLFHGDYQVQINHPSKKNYNLSRHLKVIPNDESKRTSQFVQFSM* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0098 561 Pfam Glycosyl hydrolase family 10 207 466 IPR001000 GO:0004553|GO:0005975
Lan7g0098 561 Gene3D Glycosidases 198 500 - -
Lan7g0098 561 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 205 496 IPR001000 GO:0004553|GO:0005975
Lan7g0098 561 Gene3D - 19 163 - -
Lan7g0098 561 SUPERFAMILY Galactose-binding domain-like 30 161 IPR008979 -
Lan7g0098 561 Pfam Carbohydrate binding domain 31 147 IPR003305 GO:0016798
Lan7g0098 561 ProSitePatterns Glycosyl hydrolases family 10 (GH10) active site. 426 436 IPR031158 -
Lan7g0098 561 SUPERFAMILY (Trans)glycosidases 194 501 IPR017853 -
Lan7g0098 561 SMART glyco_10 243 496 IPR001000 GO:0004553|GO:0005975
Lan7g0098 561 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE 2 536 - -
Lan7g0098 561 PANTHER GLYCOSYL HYDROLASE 2 536 IPR044846 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0098 Lan-Chr7 524842 527951 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0098 4 539 Glycoside Hydrolase AT4G33840 56.642 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0098 - - gmx:100775272 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0098 7 524842 527951 Lan8g1839 8 24778844 24782022 LSH
Lan7g0098 7 524842 527951 Lan13g0162 13 981536 986935 LSH