Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan7g0026 | ATGAATTCCCCTGTTTCAAAAGACCCAATGAATTCCCCTGTTTCAAAAGACCCAATGAATTCCCCTGTTTCAAAAGACCCAATGAATTCCCCTGTTTCAAAAGACCCAATGAATTCCCCTGTTTCAAAAGACCCAATGAATTCCCCTGTTTCAAAAGACCCAATGAATTCCCCTGTTTCAAAAGACCCAATGAATTCCCCTGTTTCAAAAGACCCAATGAATTCCCCTGTTTCAAAAGACCCAATGAATTCCCCTGTTTCAAAAGACCCAATGAATTCCCATGTTTCAAAAAACAAACTTTCTTCAACAATGATTTCCCCTGTTTCAAAAACTAGCTTTTCTAATTCTAGTCCACCCTTCTCTGCACCATCTTCAAGTTCTGGTAATAGCAGCTTTAGCAGCAGTTATAGCAACAGCGAAACCGATGAAAACCCTCTTTCCTCTCAACGTTTCTCAATCCAAGATGTCAAATATCAAATCCCAACAAAATGCATTAGCTTGCCCAATTCACATTCGCATCGATCCTTAGCTGTTCTTTCAGGCCATGTTGGTACTGTTTCATGCTTAGCCGTGTGTGGAGAATTCATATTAAGTGCTTCCCAGGGAAAAGACATCATAGTGTGGCAACAACCAGATTTGAGGTTGTTCGCAAAGTTCGGTCATGGTGATGGTTCTGTCAAAGCCCTTGTATCCATTGGGAACAAGGTTTTCACGGCACACCAAGATAGCAGGATCAGGGTTTGGAAAGTTTCAAGGAGTTCAGAGAATGTGTTCAAACTTGCTGATACTCTTCCAACAACTAAGGACTATTGGGGGAAATTCATGAAGCAGAGCAATTATGTTCAAACTAGGAGGCACCACAAGCGTTTGTGGATTGAACATGCTGATAGCATTTCTTGTTTGAGTGTTTATAATGGTTTGATTTATTCAGGTTCTTGGGATAGGACCCTTAAGGTTTGGAGGGTCTCGGATTTGAAGTGTTTGGAGTCAATTAAGGCGCATGATGATGCTATTAATGGATTGGTAGCAGGTAAAGGGGTTGTGTATTCTGCTTCTGCTGATGGAAAGATTAAAGCTTGGGGGAAAGAAGGGAAGAAGGATTCACATTGCTTAAAAGGGGTACTTCAAGGTCATAAAGATGTTTCTTTTAATTCTGTGGTTGTTTCTGATGATGGGAAATGGGTTTATGGAGGTGGTTCCGATGGTTTTGTTATAGGGTGGGAGGTGGATGGGAGTTTTGAAAGTTGGAAACTTGTTTCTAAGACTAAGGCACATGAAATGGCTGTTTTGTGCATGTGCCTAATGGGAGAGTTTTTGTGCAGTGGATCAGCTGATAAAAACATTAGTATTTGGAAGAGAGAGGCTTTTGGGAACCTTTGTAAAGTTGGTGTAATAGGTGGCCATGAAGGGCCAGTGAAATGTTTGCAAGCATCATGTAATAGAATTCGTGATGGGTTTATGCTCTATAGTGGAAGCCTTGACAGAAGTGTCAGAGTTTGGTGGGTTCCAATTCCAAAGTATAATAATAATATACAAGTAGAAGAAGATAACTCTAAAACACTTAACACAATGAACCAATGCATCATCTCATCATGTTAG | 1599 | 0.4046 | MNSPVSKDPMNSPVSKDPMNSPVSKDPMNSPVSKDPMNSPVSKDPMNSPVSKDPMNSPVSKDPMNSPVSKDPMNSPVSKDPMNSPVSKDPMNSHVSKNKLSSTMISPVSKTSFSNSSPPFSAPSSSSGNSSFSSSYSNSETDENPLSSQRFSIQDVKYQIPTKCISLPNSHSHRSLAVLSGHVGTVSCLAVCGEFILSASQGKDIIVWQQPDLRLFAKFGHGDGSVKALVSIGNKVFTAHQDSRIRVWKVSRSSENVFKLADTLPTTKDYWGKFMKQSNYVQTRRHHKRLWIEHADSISCLSVYNGLIYSGSWDRTLKVWRVSDLKCLESIKAHDDAINGLVAGKGVVYSASADGKIKAWGKEGKKDSHCLKGVLQGHKDVSFNSVVVSDDGKWVYGGGSDGFVIGWEVDGSFESWKLVSKTKAHEMAVLCMCLMGEFLCSGSADKNISIWKREAFGNLCKVGVIGGHEGPVKCLQASCNRIRDGFMLYSGSLDRSVRVWWVPIPKYNNNIQVEEDNSKTLNTMNQCIISSC* | 533 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan7g0026 | 532 | PANTHER | F-BOX AND WD40 DOMAIN PROTEIN | 115 | 517 | IPR045182 | - | |
| Lan7g0026 | 532 | Gene3D | - | 282 | 376 | IPR015943 | GO:0005515 | |
| Lan7g0026 | 532 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 291 | 330 | IPR001680 | GO:0005515 | |
| Lan7g0026 | 532 | Gene3D | - | 162 | 281 | IPR015943 | GO:0005515 | |
| Lan7g0026 | 532 | SUPERFAMILY | WD40 repeat-like | 174 | 502 | IPR036322 | GO:0005515 | |
| Lan7g0026 | 532 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 465 | 500 | IPR001680 | GO:0005515 | |
| Lan7g0026 | 532 | Pfam | WD domain, G-beta repeat | 462 | 500 | IPR001680 | GO:0005515 | |
| Lan7g0026 | 532 | Pfam | WD domain, G-beta repeat | 293 | 320 | IPR001680 | GO:0005515 | |
| Lan7g0026 | 532 | Pfam | WD domain, G-beta repeat | 418 | 452 | IPR001680 | GO:0005515 | |
| Lan7g0026 | 532 | Pfam | WD domain, G-beta repeat | 373 | 405 | IPR001680 | GO:0005515 | |
| Lan7g0026 | 532 | SMART | WD40_4 | 458 | 501 | IPR001680 | GO:0005515 | |
| Lan7g0026 | 532 | SMART | WD40_4 | 368 | 408 | IPR001680 | GO:0005515 | |
| Lan7g0026 | 532 | SMART | WD40_4 | 284 | 321 | IPR001680 | GO:0005515 | |
| Lan7g0026 | 532 | SMART | WD40_4 | 212 | 249 | IPR001680 | GO:0005515 | |
| Lan7g0026 | 532 | SMART | WD40_4 | 415 | 452 | IPR001680 | GO:0005515 | |
| Lan7g0026 | 532 | SMART | WD40_4 | 324 | 361 | IPR001680 | GO:0005515 | |
| Lan7g0026 | 532 | SMART | WD40_4 | 172 | 209 | IPR001680 | GO:0005515 | |
| Lan7g0026 | 532 | MobiDBLite | consensus disorder prediction | 1 | 150 | - | - | |
| Lan7g0026 | 532 | PANTHER | OS01G0946100 PROTEIN | 115 | 517 | - | - | |
| Lan7g0026 | 532 | CDD | WD40 | 175 | 500 | - | - | |
| Lan7g0026 | 532 | Gene3D | - | 377 | 528 | IPR015943 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan7g0026 | Lan-Chr7 | 138642 | 140557 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan7g0026 | 328 | 522 | Miscellaneous Gene Families | AT5G08390 | 26.108 | 1.46e-06 | 49.3 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan7g0026 | - | - | lang:109353136 | 1028.08 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lan7g0026 | 7 | 138642 | 140557 | Lan8g1924 | 8 | 25299783 | 25301454 | LSH | |
| Lan7g0026 | 7 | 138642 | 140557 | Lan13g0060 | 13 | 330888 | 332928 | LSH |