Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2153 ATGTTTTCAGGGGTAACAGGAATAATGAATAGAGGGCAAAAGATAAAAGGGAGAGTGGTATTGATGAGGAAGAATTTGTTGGATTTTAACACTATTTCTAGTATTCCAAGTGGAGGTGTTGAAGGAGTCATAGGGAGTGGTCTTAATGTCATTGGTTCAACACTTGATGGACTCACTGCCTTCTTGGGCCGTAGTGTCTCACTTCAGCTCATTAGTGCTACCCAACTTGATGAAAATGGAAATGGGAAAGTTGGAAAGGACACATTTTTAGAAGGTATCATTGCATCATTACCAACCTTAGGAGCAGGAGAATCAGCATTCAGCATTCATTTTGAATGGGACAATAGTATGGGAATTCCTGGTGCATTCTACATCAAAAACTACATGCAAGTTGAGTTTTACCTCAAGAGTTTAACTCTTGAAGATGTTCCAAACCATGGAACCATCCATTTTGTTTGCAACTCTTGGGTTTACAACTCTAAACTTTATAACAAAAGAGAACGTATTTTCTTTGCCAACAAGACATATGTTCCTAGTGAAACACCAGCTCCACTTGTGAAGTATAGAGAAGAAGAATTGAAAATCTTAAGAGGAGATGGAACAGGAGAACGCAAAGAATGGGAGAGGATTTATGATTATGATGTTTATAATGACTTAGGCAATCCGGATAGTAGCGAAAAGCTTGTTCGCCCGATTTTGGGAGGGTCTAGCATCCATCCTTACCCTCGCAGGGGAAGAACCGGAAGATATCCAACGAGGAAAGATCCAAAGTGTGAGAAGCCAGGGGAAGTTTATGTTCCAAGAGATGAAAATTTTGGTCACTTGAAGTCTTCAGACTTTCTTATATATGGACTTAAATCTCTATCTCAATATGTGTTACCAGCATTCCAATCTGTGTTTGATTTAAATTTCACACCAAATGAGTTTGATAGCTTCCAAGATGTGCGCGACCTCTATGAAGGTGGAATTAAGTTGCCCTTAGATGTAATTAGTACAATTAGTCCCTTGCCGGTGATCAAAGAACTCTTTCGTACCGATGGCGAACAAGTCCTCAAGTTTCCACCACCTCACATCATTCAAGTGAGCAAGTCTGCATGGATAACTGATGAAGAATTTGCAAGAGAGATGCTGGCCGGTGTAAATCCTTGCTTAATTCGGCGTCTGCAAGAGTTTCCTCCAAGAAGCAACCTAGATCCTGAAACCTATGGCGACCAAACCAGTAAGATAACCGCAGAAGCCCTTGAACTAGATGGATGCACAGTAGAAGAGGCACTTTCTAAGCAGAGATTATTTATACTAGACTACCATGATGTGTTCATGCCGTATTTGAGAAGGATAAATCAAACTTCTGCCAAGTCTTATGCCACTAGGACCATCCTTTTCTTAAGAGACAACGGTACTTTAAAGCCGGTGGCCATTGAGTTAAGTTTGCCACATCCTGATGGAGATGAATCAGGTGCAGTTAGTAAAGTCATCTTACCTGCAAAAGAAGGTGTTGAAAGTACAATTTGGCTACTTGCCAAAGCTTATGTAGTCGTAAACGATTCTTGCTATCATCAACTCATGAGCCATTGGTTAAATACCCATGCAGTTGTTGAGCCGTTCGTCATAGCGACAAATCGACAGTTGAGCGTGCTTCATCCGATTCATAAACTCCTACATCCTCACTATCGTGATACCATGAACATCAACGCACTTGCACGGCAATCTCTAATCAATGCTGATGGAACTGGGAAAGGAAAAGTTGGTAAAGAAACATTCTTGGAAGGTATCATTACTTCTTTACCAACCTTAGGAGCTCAGGAAAGTGCATTCAGCATTCATTTTGAATGGGATGATGAGTTTGGTATTCCTGGTGCATTTTTTATCAAGAACTTTCTTCAAGTTGAGTTCTACCTTAAGAGTCTCACTCTTGAAGATGTTCCAAACATTGGAACCATTCACTTTATTGCCAACTCTTGGGTTTACAATTCCAAGTCTTACAAGCAAGATCGCATTTTCTTTGCCAACCATACATATCTTCCAAGTGCAACACCTGCTCCACTTGTGAAGTACAGAGAAGAAGAACTGAAGGTTTTAAGAGGAGATGGAACAGGAGAGCGCAAGGAATATGACAGGATCTATGATTATGATGTTTACAATGACTTGGGAAAACCCGATAGCGGTGCGCCCCGTCCTATTCTTGGAGGGTCTACCTTGCCTTACCCTCGAAGGGGAAGAACCGGAAGAAAAGCAACTAAGAAAGATCCAAAAAGTGAGGTACCCGGCGATTTTGTTTACATTCCAAGAGACGAAGCATTCGGTCACGTAAAATCATCAGATTTCCTTGCTTCTGGACTAAAATCTGTAGCATCAGATGTGGTACCTGTGTTGACAGATGCATTTGATGGAAATATCCTAAGTCTTGAGTTTGATAACTTCCAGGAAGTGAATAAACTTTATGAAGGTGGAATTACTCTGCCTACAAACTTTCTTAAGAAGTTTGCTCCTCCTATTCCAGTTCTCCAAGAAATTCTTAGAACTGATGGTGAACAATTCCTCAAGTTTCCAGTGCCGAATGTGATTCAAGTTGATAAGTCTGCATGGAAGAGTGATGAAGAATTCGGAAGAGAAACGATTGCTGGATTGAATCCTAATGTCATTAGAATTCTTGAGGAGTTCCCAATAACTAGCAAGCTTGATACCCAAGCCTATGGTGATAATAACAGTAAAATCACAAAAGAACATTTAGAGCCTAATTTGGGTGGCCTCACTGTTGAACAGGCTATCCAGAACAAGAAATTGTTCATATTGAATCACCATGACTATCTCATTCCATACCTGAGGAGAATAAATGCAACTACCACAAAGGCTTATGCCACAAGAACCATCTTTTTATTGAAAGATGACGGTACTTTAACACCATTGGCCATTGAGTTGAGTAAGCCACATCCTCAAGGAGATGAACATGGTCCTGTTACTGATGTCTATGTGCCTGCACATGAAGGTCCTGAAGCTTATATTTGGTTATTGGCCAAGGCTTATGTTGTTGTAAACGACTCGTGCTACCATCAACTAGTTAGCCATTGGTTAAACACTCATGCAGTTGTCGAGCCATTTATCTTAGCGACAAATAGGCATCTGAGTGTGGTTCACCCAATTTATAAGCTTCTGTTTCCTCACTACCGTGACACGATGAATATAAACTCGCTTGCAAGGAAAGCCCTTGTCAACGCAGATGGTATCATAGAGTCAACATTCTTGTGGGGCCAGTACTCTTTGGAATTGTCTGCTGTGATCTATAAGGATTGGGTTTTTCCGGATCAAGCACTACCCGCTGATCTTCTCAAGAGAGGAGTGGCTGTTAAGGATGAATCTGCTCCCCACGGCCTTCGCCTTGTGATTGAGGACTACCCTTATGCTTCCGATGGATTAGAAATATGGGCAGCTATTAAGACATGGGTCCAAGAATATGTCTCATTCTACTACAAGTCAGATGATAAACTCAAACAAGACCCTGAACTCCAAGCTTGGTGGAAAGAACTTGTCGAGGTAGGTCATGGTGATTTGAAAGATAAGCCATGGTGGCCTAAGTTGCAAACTCGCGAAGAGTTGGTTGAAATTTCCACTACCCTCATATGGACTGCTTCAGCACTTCACGCAGCTGTTAATTTCGGACAGTATCCATATGGAGGTTATATCCTTAACAGGCCAACGCTTACTCGGAAGTTCATTCCTGAGAAAGGTTCTCCTGAGTATGATCAGTTGTCCAAGAACCCCGAGAAGGTGTTTTTGAGTACAATCACAGGAAAGAAAGAGACACTTATTGATCTTACTGTTATTGAAATCTTGTCAAAGCATGCTTCTGATGAGTTGTACCTTGGGCAGCGAGATGGCGGTGATAAATTCACTTCTGATGTGGAGGCAGTACAGGCCTTTAATAGGTTCGGAAAGAAGCTTGCAGAGATTGAGAAAAAACTAGTACTTAAGAACGCTGATGAGAACTTGAAAAACCGTACCGGGCCAGCTAAGCTTCCTTACACTTTGCTTTATCCTTCAAGCGAGGAAGGATTGACTTTCAGAGGAATTCCCAACAGTATCTCTATCTAA 4089 0.414 MFSGVTGIMNRGQKIKGRVVLMRKNLLDFNTISSIPSGGVEGVIGSGLNVIGSTLDGLTAFLGRSVSLQLISATQLDENGNGKVGKDTFLEGIIASLPTLGAGESAFSIHFEWDNSMGIPGAFYIKNYMQVEFYLKSLTLEDVPNHGTIHFVCNSWVYNSKLYNKRERIFFANKTYVPSETPAPLVKYREEELKILRGDGTGERKEWERIYDYDVYNDLGNPDSSEKLVRPILGGSSIHPYPRRGRTGRYPTRKDPKCEKPGEVYVPRDENFGHLKSSDFLIYGLKSLSQYVLPAFQSVFDLNFTPNEFDSFQDVRDLYEGGIKLPLDVISTISPLPVIKELFRTDGEQVLKFPPPHIIQVSKSAWITDEEFAREMLAGVNPCLIRRLQEFPPRSNLDPETYGDQTSKITAEALELDGCTVEEALSKQRLFILDYHDVFMPYLRRINQTSAKSYATRTILFLRDNGTLKPVAIELSLPHPDGDESGAVSKVILPAKEGVESTIWLLAKAYVVVNDSCYHQLMSHWLNTHAVVEPFVIATNRQLSVLHPIHKLLHPHYRDTMNINALARQSLINADGTGKGKVGKETFLEGIITSLPTLGAQESAFSIHFEWDDEFGIPGAFFIKNFLQVEFYLKSLTLEDVPNIGTIHFIANSWVYNSKSYKQDRIFFANHTYLPSATPAPLVKYREEELKVLRGDGTGERKEYDRIYDYDVYNDLGKPDSGAPRPILGGSTLPYPRRGRTGRKATKKDPKSEVPGDFVYIPRDEAFGHVKSSDFLASGLKSVASDVVPVLTDAFDGNILSLEFDNFQEVNKLYEGGITLPTNFLKKFAPPIPVLQEILRTDGEQFLKFPVPNVIQVDKSAWKSDEEFGRETIAGLNPNVIRILEEFPITSKLDTQAYGDNNSKITKEHLEPNLGGLTVEQAIQNKKLFILNHHDYLIPYLRRINATTTKAYATRTIFLLKDDGTLTPLAIELSKPHPQGDEHGPVTDVYVPAHEGPEAYIWLLAKAYVVVNDSCYHQLVSHWLNTHAVVEPFILATNRHLSVVHPIYKLLFPHYRDTMNINSLARKALVNADGIIESTFLWGQYSLELSAVIYKDWVFPDQALPADLLKRGVAVKDESAPHGLRLVIEDYPYASDGLEIWAAIKTWVQEYVSFYYKSDDKLKQDPELQAWWKELVEVGHGDLKDKPWWPKLQTREELVEISTTLIWTASALHAAVNFGQYPYGGYILNRPTLTRKFIPEKGSPEYDQLSKNPEKVFLSTITGKKETLIDLTVIEILSKHASDELYLGQRDGGDKFTSDVEAVQAFNRFGKKLAEIEKKLVLKNADENLKNRTGPAKLPYTLLYPSSEEGLTFRGIPNSISI* 1363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2153 1362 Gene3D - 383 515 - -
Lan6g2153 1362 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 12 176 IPR036392 GO:0005515
Lan6g2153 1362 Gene3D - 995 1361 - -
Lan6g2153 1362 ProSiteProfiles PLAT domain profile. 539 669 IPR001024 GO:0005515
Lan6g2153 1362 SMART LH2_4 13 173 IPR001024 GO:0005515
Lan6g2153 1362 SMART LH2_4 547 670 IPR001024 GO:0005515
Lan6g2153 1362 Gene3D - 177 275 - -
Lan6g2153 1362 Gene3D - 674 770 - -
Lan6g2153 1362 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 175 576 IPR013819 GO:0016702|GO:0046872
Lan6g2153 1362 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 574 673 IPR036392 GO:0005515
Lan6g2153 1362 Pfam Lipoxygenase 185 577 IPR013819 GO:0016702|GO:0046872
Lan6g2153 1362 Pfam Lipoxygenase 682 1345 IPR013819 GO:0016702|GO:0046872
Lan6g2153 1362 ProSitePatterns Lipoxygenases iron-binding region signature 2. 1044 1054 IPR020834 GO:0016702|GO:0046872
Lan6g2153 1362 SUPERFAMILY Lipoxigenase 177 577 IPR036226 -
Lan6g2153 1362 SUPERFAMILY Lipoxigenase 674 1362 IPR036226 -
Lan6g2153 1362 PANTHER SEED LINOLEATE 13S-LIPOXYGENASE-1 576 1362 - -
Lan6g2153 1362 PANTHER SEED LINOLEATE 13S-LIPOXYGENASE-1 1 576 - -
Lan6g2153 1362 ProSitePatterns Lipoxygenases iron-binding region signature 1. 519 533 IPR020833 GO:0016702|GO:0046872
Lan6g2153 1362 CDD PLAT_LH2 14 173 IPR042057 -
Lan6g2153 1362 PRINTS Plant lipoxygenase signature 639 657 IPR001246 GO:0016491
Lan6g2153 1362 PRINTS Plant lipoxygenase signature 665 686 IPR001246 GO:0016491
Lan6g2153 1362 PRINTS Plant lipoxygenase signature 704 720 IPR001246 GO:0016491
Lan6g2153 1362 PRINTS Plant lipoxygenase signature 734 753 IPR001246 GO:0016491
Lan6g2153 1362 PRINTS Plant lipoxygenase signature 801 822 IPR001246 GO:0016491
Lan6g2153 1362 PRINTS Plant lipoxygenase signature 847 863 IPR001246 GO:0016491
Lan6g2153 1362 PRINTS Plant lipoxygenase signature 886 905 IPR001246 GO:0016491
Lan6g2153 1362 PRINTS Plant lipoxygenase signature 952 976 IPR001246 GO:0016491
Lan6g2153 1362 PRINTS Plant lipoxygenase signature 1274 1288 IPR001246 GO:0016491
Lan6g2153 1362 ProSitePatterns Lipoxygenases iron-binding region signature 2. 546 556 IPR020834 GO:0016702|GO:0046872
Lan6g2153 1362 Gene3D - 276 364 IPR027433 -
Lan6g2153 1362 Gene3D - 771 860 IPR027433 -
Lan6g2153 1362 PANTHER LIPOXYGENASE 1 576 IPR000907 GO:0016702|GO:0046872
Lan6g2153 1362 PANTHER LIPOXYGENASE 576 1362 IPR000907 GO:0016702|GO:0046872
Lan6g2153 1362 MobiDBLite consensus disorder prediction 720 753 - -
Lan6g2153 1362 ProSiteProfiles PLAT domain profile. 46 171 IPR001024 GO:0005515
Lan6g2153 1362 ProSitePatterns Lipoxygenases iron-binding region signature 1. 1017 1031 IPR020833 GO:0016702|GO:0046872
Lan6g2153 1362 Gene3D PLAT/LH2 domain 4 176 - -
Lan6g2153 1362 Gene3D PLAT/LH2 domain 563 673 - -
Lan6g2153 1362 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 672 1362 IPR013819 GO:0016702|GO:0046872
Lan6g2153 1362 PRINTS Lipoxygenase signature 501 518 IPR013819 GO:0016702|GO:0046872
Lan6g2153 1362 PRINTS Lipoxygenase signature 519 536 IPR013819 GO:0016702|GO:0046872
Lan6g2153 1362 PRINTS Lipoxygenase signature 539 559 IPR013819 GO:0016702|GO:0046872
Lan6g2153 1362 Pfam PLAT/LH2 domain 80 171 IPR001024 GO:0005515
Lan6g2153 1362 Pfam PLAT/LH2 domain 577 668 IPR001024 GO:0005515
Lan6g2153 1362 Gene3D - 861 994 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2153 Lan-Chr6 31967249 31986896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2153 1 576 Acyl Lipid Metabolism Gene Families AT1G55020 56.711 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2153 K15718 - gmx:547836 1339.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2153 6 31967249 31986896 Lan3g0236 3 1544504 1549874 LSH
Lan6g2153 6 31967249 31986896 Lan9g0628 9 9158966 9164432 PCT
Lan2g0392 2 3979546 3983075 Lan6g2153 6 31967249 31986896 PCT