Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0392 AAAAAAAAAAAAACAAAAAATATTGATTTAACAGGTGCAAAAAGTGTTGGAGGTATTGTAAGTGGTGGCCTCAACCTTGTTGGTGGTATTGTTGGTGGTATTGTTGATGCTGCCACTTCTTTCTTGGGTCAATCCATTGGTTTTAAACTCATTAGTGCTACTTCTTCTGATGGAAGTGGAAAAGGGAAGGTTGGAAAACTAGCATACTTGGAGAAACATCTTCCTTCATTACCAAACTTGGGTGCTAATCAGGAAGCTTTCAATGTTCATTTTGAATGGGATTCTGACTTTGGAATTCCTGGTGCTTTTTATATTGAGAATTTTACTCAATCTGAATTCTTCCTTGTTAGTTTGACCCTTGAAGATGTTCCTAATCAAGGAACTATCCACTTTCTATGCAACTCATGGGTTTACAACAAAAAGAAGTATGACACTGATCGCATTTTCTTCGCCAACAAGACATATCTCCCTGGGAAAACACCAGCTCCACTAGTGTATTATAGACAAGAAGAGTTGAAAACTTTAAGAGGGGATGGAAAAGGAGAGCGTAAGGAGTGGGAAAGGATTTATGATTATGATGTCTACAATGATCTTGGTGAACCGGACAAGAATGCCAGCTTGGCTCGTCCTGTTCTTGGAGGATCGAGTGAGTTGCCTTACCCTCGCAGGGGAAGAACTGGCCGAAAACCATCTAGGAAAGATCCTAAGAGCGAGAGCCGAAGTGACATTGTTTACCTACCAAGAGATGAATCATTTGGTCACTTGAAGTCCTCTGATTTTCTTGTCTATATACTTAAATCTGCATCTCAAAATGTTATACCACAGTTGCAATCTGCGATTCGCTTACAATTCAATCAGCCCGAGTTTAACAGCTTTGAAGATGTTCGAGGACTGTATGATGGTGGAATTAAGCTTCCTACCAATATACTAAGTGACATTAGCCCAATCCCTTTGTTCAAGGAACTCTTCAGAACTGATGGTGAACAAGCCTTAAAGTTTCCAGAACCTAATGTGATTCAAGTGGAGAAGTCTGCATGGACGACTGATGAAGAATTTGCAAGAGAGATGATTGCTGGAGTGAATCCACACATTATTACTAGACTTCAGGAGTTTCCACCAAAGAGCAAGCTTGATCCCCAAGTCTATGGTGATAATACCAGTACAATAACCAAAGAACACTTGGAGCCGAACTTGGATGGGCTCACTGTAGAACAGGCTATTGCAGAAAACAAGTTGTTCATACTTAATCACCATGACACAATCATTCCATATTTGAGGAAAATAAATGCAACTGACACTCGAAAGGCCTATGCTACGAGAACCATCCTTTTCTTGCAAAGCAATGGAACGTTAAAGCCATTGGCCATTGAGCTAAGTAAGCCACATCCTCAGGGTGATAATTATGGTCCTATTAGTAATGTTTACCTACCAGCAGACCAAGGTGCTGATGGTTCTCTGTGGCTGCTTGCCAAGGCTTATGTAATCGTAAACGACTCCAGCTTTCATCAACTTGTTAGCCACTGGTTAAACACTCATGCAGTTGTTGAGCCATTCATCATTGCAACAAACAGGCACCTTAGTGTTGTTCATCCAGTTCATAAACTTTTACTTCCACACTATCGCGATACAATGAACATTAATGCACTTGCGCGGAATGTGTTGATCAATGCAGAGGGTATTATTGAGACAACATTCTTGTGGGGGAAATATTCTTTGGAAAACTCTGCTGTTATTTACAAGGAATGGGTTTTTCCTGAGCAAGCACTACCTGCCGATCTTATCAAGAGGGGAGTGGCTGTTGAAGACCCATCTTCGCCCCACGGAATCCGTCTTCTAATAGACGACTATCCTTATGCTGCTGATGGACTAGAGATATGGGCTGCAATCAAGTCATGGGTCGAAGAATATGTCTCTTTCTACTATGAGTCAGATGCTGCAATTGCACAAGATGCTGAACTCCAAGCTTTCTGGAAAGAACTTGTAGAGGTGGGTCATGGTGACAAGAAAAATGCGCCATGGTGGCCGAAGTTGCAAACTCGCAAAGAATTGATTGAAATTGCCAGTACCCTCATATGGACTGCTTCAGCCCTTCATGCTGCTGTTAACTTTGGACAGTATCCATATGGAGGTTATATCCTTAACCGCCCGACTCTTAGCAGAAGATTCATTCCCGAGAAAGGATCACCCGAGTATGATGAGCTAGCCAAGAACCCTCAGAAGGTGTTTTTGAAAACAATCACCCCAAAGAATGAGACCCTTACTGACCTTACAATTATAGAGGTCTTATCAAGGCATGCTTCTGATGAAGTCTACCTTGGACAGAGAGATGGTGGTGATATTTGGACTTCTGATGCACAACCAATTGAGGCCTTTAGGAAGTTTGGTAAGAAGTTAGCAGAAATTGAGAAAAAGCTTATAGAGAGGAACAATGATGAGACATTGAGGAACCGTTACGGGCCGGTGAAGCTGCCTTACACTCTACTCTATCCTTCCAGTGAGGAAGGATTGACTTTCAGAGGCATTCCAAACAGCATCTCTATCTAA 2544 0.4182 KKKKTKNIDLTGAKSVGGIVSGGLNLVGGIVGGIVDAATSFLGQSIGFKLISATSSDGSGKGKVGKLAYLEKHLPSLPNLGANQEAFNVHFEWDSDFGIPGAFYIENFTQSEFFLVSLTLEDVPNQGTIHFLCNSWVYNKKKYDTDRIFFANKTYLPGKTPAPLVYYRQEELKTLRGDGKGERKEWERIYDYDVYNDLGEPDKNASLARPVLGGSSELPYPRRGRTGRKPSRKDPKSESRSDIVYLPRDESFGHLKSSDFLVYILKSASQNVIPQLQSAIRLQFNQPEFNSFEDVRGLYDGGIKLPTNILSDISPIPLFKELFRTDGEQALKFPEPNVIQVEKSAWTTDEEFAREMIAGVNPHIITRLQEFPPKSKLDPQVYGDNTSTITKEHLEPNLDGLTVEQAIAENKLFILNHHDTIIPYLRKINATDTRKAYATRTILFLQSNGTLKPLAIELSKPHPQGDNYGPISNVYLPADQGADGSLWLLAKAYVIVNDSSFHQLVSHWLNTHAVVEPFIIATNRHLSVVHPVHKLLLPHYRDTMNINALARNVLINAEGIIETTFLWGKYSLENSAVIYKEWVFPEQALPADLIKRGVAVEDPSSPHGIRLLIDDYPYAADGLEIWAAIKSWVEEYVSFYYESDAAIAQDAELQAFWKELVEVGHGDKKNAPWWPKLQTRKELIEIASTLIWTASALHAAVNFGQYPYGGYILNRPTLSRRFIPEKGSPEYDELAKNPQKVFLKTITPKNETLTDLTIIEVLSRHASDEVYLGQRDGGDIWTSDAQPIEAFRKFGKKLAEIEKKLIERNNDETLRNRYGPVKLPYTLLYPSSEEGLTFRGIPNSISI* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0392 847 Gene3D - 156 255 - -
Lan2g0392 847 SMART LH2_4 13 152 IPR001024 GO:0005515
Lan2g0392 847 ProSitePatterns Lipoxygenases iron-binding region signature 1. 502 516 IPR020833 GO:0016702|GO:0046872
Lan2g0392 847 Pfam PLAT/LH2 domain 58 150 IPR001024 GO:0005515
Lan2g0392 847 PRINTS Lipoxygenase signature 484 501 IPR013819 GO:0016702|GO:0046872
Lan2g0392 847 PRINTS Lipoxygenase signature 502 519 IPR013819 GO:0016702|GO:0046872
Lan2g0392 847 PRINTS Lipoxygenase signature 522 542 IPR013819 GO:0016702|GO:0046872
Lan2g0392 847 PANTHER LIPOXYGENASE 22 847 IPR000907 GO:0016702|GO:0046872
Lan2g0392 847 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 20 155 IPR036392 GO:0005515
Lan2g0392 847 Pfam Lipoxygenase 164 830 IPR013819 GO:0016702|GO:0046872
Lan2g0392 847 ProSitePatterns Lipoxygenases iron-binding region signature 2. 529 539 IPR020834 GO:0016702|GO:0046872
Lan2g0392 847 Coils Coil 796 816 - -
Lan2g0392 847 SUPERFAMILY Lipoxigenase 156 847 IPR036226 -
Lan2g0392 847 Gene3D - 256 344 IPR027433 -
Lan2g0392 847 Gene3D PLAT/LH2 domain 2 155 - -
Lan2g0392 847 PRINTS Plant lipoxygenase signature 121 139 IPR001246 GO:0016491
Lan2g0392 847 PRINTS Plant lipoxygenase signature 147 168 IPR001246 GO:0016491
Lan2g0392 847 PRINTS Plant lipoxygenase signature 186 202 IPR001246 GO:0016491
Lan2g0392 847 PRINTS Plant lipoxygenase signature 219 238 IPR001246 GO:0016491
Lan2g0392 847 PRINTS Plant lipoxygenase signature 286 307 IPR001246 GO:0016491
Lan2g0392 847 PRINTS Plant lipoxygenase signature 331 347 IPR001246 GO:0016491
Lan2g0392 847 PRINTS Plant lipoxygenase signature 370 389 IPR001246 GO:0016491
Lan2g0392 847 PRINTS Plant lipoxygenase signature 437 461 IPR001246 GO:0016491
Lan2g0392 847 PRINTS Plant lipoxygenase signature 759 773 IPR001246 GO:0016491
Lan2g0392 847 Gene3D - 480 846 - -
Lan2g0392 847 MobiDBLite consensus disorder prediction 205 242 - -
Lan2g0392 847 ProSiteProfiles PLAT domain profile. 20 151 IPR001024 GO:0005515
Lan2g0392 847 PANTHER LINOLEATE 9S-LIPOXYGENASE-4 22 847 - -
Lan2g0392 847 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 154 847 IPR013819 GO:0016702|GO:0046872
Lan2g0392 847 Gene3D - 345 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0392 Lan-Chr2 3979546 3983075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0392 32 847 Acyl Lipid Metabolism Gene Families AT1G55020 58.937 0.0 1006
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0392 K15718 - gmx:100816880 1435.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g0392 2 3979546 3983075 Lan6g2153 6 31967249 31986896 PCT
Lan2g0392 2 3979546 3983075 Lan3g0236 3 1544504 1549874 PCT