Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2124 ATGGGTCTTGACAAATGGGTCAACTTTTTTATGATTCTTAGTTTCTTTGCTGCAACAACACCCATCTTCTCAGATTCTAGTTCATTTACTTCCAAGTTCCTTGATTTGGCTAAGGAGCCTCATGTTTTTGATTGGATGGTGGATATTAGAAGGAAGATTCATGAGAATCCTGAAATGGGTTTTGAAGAATTTAAGACCAGTGAGCTTATAAGATCAGAATTGAGAAAGTTGGAGATTCCATATAAATACCCTGTTGCAATTACTGGTGTTATTGGATACATAGGAACTGGAAAACCTCCCTTTGTTGCTTTAAGAGCTGATATGGATGCTCTTCTTATGCAGGAGCTGGGGGATTGGGAGCACAAGAGTAAAGTACCTGGGAAGATGCATGCATGTGGTCATGATGCTCATGTTGCTATGCTTCTTGGTGCTGCAAAGATCCTCAAAGAGCATGAAAAATATATACCGGGAACTGTAGTTCTTGTTTTTCAACCAGCAGAGGAAGGAGGAGGAGGGGCTAAGAAAATCGTAGATGTTGGAGCTTTACAAAATATTTCTGCAATATTCGGATTGCATGTTGCACCTCACATCCCATTGGGTGAAGTCGCCTCTAGGTCTGGTCCCATGGGTGCAGGAAGCTCCTTATTTGAAGCAAGAATAAGTGGTAAGGGAGGCCATGCCGCTATTCCTCATCATGCTATAGACCCCATATTGGCAGCTTCTAACGTAATTGTTAGCTTACAACATCTTGTTTCTCGCGAGGCCGATCCTCTCGACTCTCAGGTTGTAACCGTGGGAAAAATCCAAGGAGGTGGTGCATTCAATGTTATTCCGGATTCTGTCACAATTGGGGGCACCATCCGAGCTTTTTCAAAAGAAAGCATGATGCAACTGAGACAGCGGATTGAGCAGGTTATCATCGGGCAAGCGGCTGTGCAGAGGTGCAATGCAACGGTCAGCTTCCTTGATAAAGAGAAACCTTACATCCCCCCAACTATAAACAATGATGACTTGCATGAATATTTCCAAAGTGTTGCTACGAGCGTGCTTGGCGTCGATAAAGTTAAGGGGACGCAACCAATGATGGGATCCGAGGACTTTTCATTCTATCAGGAGGTTATACCCGGTTACTTCTTCCTCCTCGGAATGGTGAATGCCTCTGTTGAACATCTTGAGTCAGCACACTCTCCCTATTTCAAAATCAATGAAGATGCACTACCTTACGGAGCTGCACTCCATGCATCATTATCTGCTAGGTATCTTCTCAAACTTAATCGGGATGTACCAGTGGTAGAGGGTAAATATAATGATGAATTATAA 1320 0.4326 MGLDKWVNFFMILSFFAATTPIFSDSSSFTSKFLDLAKEPHVFDWMVDIRRKIHENPEMGFEEFKTSELIRSELRKLEIPYKYPVAITGVIGYIGTGKPPFVALRADMDALLMQELGDWEHKSKVPGKMHACGHDAHVAMLLGAAKILKEHEKYIPGTVVLVFQPAEEGGGGAKKIVDVGALQNISAIFGLHVAPHIPLGEVASRSGPMGAGSSLFEARISGKGGHAAIPHHAIDPILAASNVIVSLQHLVSREADPLDSQVVTVGKIQGGGAFNVIPDSVTIGGTIRAFSKESMMQLRQRIEQVIIGQAAVQRCNATVSFLDKEKPYIPPTINNDDLHEYFQSVATSVLGVDKVKGTQPMMGSEDFSFYQEVIPGYFFLLGMVNASVEHLESAHSPYFKINEDALPYGAALHASLSARYLLKLNRDVPVVEGKYNDEL* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2124 439 PIRSF Amidohydrol_AmhX 31 425 IPR017439 GO:0016787
Lan6g2124 439 Pfam Peptidase family M20/M25/M40 103 416 IPR002933 GO:0016787
Lan6g2124 439 Gene3D Zn peptidases 46 406 - -
Lan6g2124 439 TIGRFAM amidohydrolases: amidohydrolase 46 408 IPR017439 GO:0016787
Lan6g2124 439 PANTHER PEPTIDASE M20 FAMILY MEMBER 4 439 IPR017439 GO:0016787
Lan6g2124 439 SUPERFAMILY Zn-dependent exopeptidases 42 421 - -
Lan6g2124 439 SUPERFAMILY Bacterial exopeptidase dimerisation domain 211 330 IPR036264 -
Lan6g2124 439 Gene3D - 211 329 - -
Lan6g2124 439 PANTHER AUXIN CONJUGATE HYDROLASE 4 439 - -
Lan6g2124 439 CDD M20_IAA_Hyd 46 421 IPR044757 GO:0009850|GO:0016787
Lan6g2124 439 Pfam Peptidase dimerisation domain 213 306 IPR011650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2124 Lan-Chr6 31750283 31753842 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2124 K21604 - gmx:100794121 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2124 6 31750283 31753842 Lan3g0216 3 1392831 1395943 LSH
Lan6g2124 6 31750283 31753842 Lan5g0605 5 12302129 12308232 PCT
Lan5g0605 5 12302129 12308232 Lan6g2124 6 31750283 31753842 PCT