Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0605 ATGGGGTTCTTCAACTTGATCAATTTCTTCATGATTTTCAATTTCTTCTCACTCTCACTCTCCGCCAATTATCTAGATGAAGCCAAGAGCCCTGATGTATTTGATTGGATGGTGAAAATAAGAAGGAAGATTCATGAGAATCCAGAATTGGGTTATGAGGAATTTAAGACAAGTGAATTGATAAGAACTGAATTGGGTAAATTGGGAATCCCTTATAGACATGATCAAGTTGCAGTAACTGCTGTTATTGCTTTCATTGGAACAGGAAATTCTCCTTTGGTTGCACTTAGAGCTGATATGGATGCTCTTCCAATGCAGGAAATGGTGGAGTGGGAGCACAAGAGTAAAGTACCTGGAAAGATGCATGCATGTGGTCATGATGCCCATGTTACCATGCTTCTTGGTGCTGCAAAGATTCTCAAGGAGCATGAAAAAGAGCTGCAAGGAACTGTTGTTCTTGTTTTCCAACCAGCAGAGGAAGGTGGTGGAGGGGCCAAGAAAATTTTAGAGGCTGGGGTCTTAGAAAATGTTACCGCTATCTTTGGATTGCATGTTGCACCTAACGTTCCAATAGGTGAAGTAGTCTCTAGGTCTGGTCCAATAATGGCAGGAAGTGGCTTCTTTGAAGCAAAAATAACCGGAAAGGGAGGTCATGCAGCTATTCCTCAAAGTTCTATAGACCCCATATTGGCAGCTTCTAATGTGATTGTTAGCTTACAACATCTTGTTTCTCGTGAAGCTGATCCTCTAGATTCCCAGGTTGTGACAGTTGCAAAATTCCAAGGAGGCAATGCATTTAATGTTATTCCAGATTCTGTCACTATTGGTGGCACCTTCAGAGCTTTTTCAAAAGAAAGCTTCAAGCAACTGAAACAGCGCATTGAGGAGGTTATCACGGGGCAAGCTGCTGTGCAGAGATGCAATGCAGTGGTGAACTTCCTTAATGACGAGAAACCTTTCTATCCTCCAACTGTAAACAATGATGACTTGCATCAACATTTTCGAAATGTCGCAGAGAATCTGCTTGGCATCAGTAAAGTTAATATCATGCAGCCAATGATGGGAGCTGAAGACTTTTCATTCTATCAAGAGCTTATACCTGGATACTTCTTCATGCTTGGAATGGAGAATCCCTCACATGAAAGGCTTAACTCATTACACTCACCATTTTTCAAAATCAATGAAGATGCACTTCCTTATGGGGCTGCACTTCATGCATCATTAGCTTCTAGTTATCTTCTCAAATACCAGCAGGATGTGCCAGAGGGAGAGGGGAAATATCATGATGAACTATAA 1296 0.4151 MGFFNLINFFMIFNFFSLSLSANYLDEAKSPDVFDWMVKIRRKIHENPELGYEEFKTSELIRTELGKLGIPYRHDQVAVTAVIAFIGTGNSPLVALRADMDALPMQEMVEWEHKSKVPGKMHACGHDAHVTMLLGAAKILKEHEKELQGTVVLVFQPAEEGGGGAKKILEAGVLENVTAIFGLHVAPNVPIGEVVSRSGPIMAGSGFFEAKITGKGGHAAIPQSSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGNAFNVIPDSVTIGGTFRAFSKESFKQLKQRIEEVITGQAAVQRCNAVVNFLNDEKPFYPPTVNNDDLHQHFRNVAENLLGISKVNIMQPMMGAEDFSFYQELIPGYFFMLGMENPSHERLNSLHSPFFKINEDALPYGAALHASLASSYLLKYQQDVPEGEGKYHDEL* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0605 431 Pfam Peptidase family M20/M25/M40 95 409 IPR002933 GO:0016787
Lan5g0605 431 PANTHER PEPTIDASE M20 FAMILY MEMBER 16 431 IPR017439 GO:0016787
Lan5g0605 431 CDD M20_IAA_Hyd 37 413 IPR044757 GO:0009850|GO:0016787
Lan5g0605 431 Gene3D Zn peptidases 37 398 - -
Lan5g0605 431 SUPERFAMILY Bacterial exopeptidase dimerisation domain 204 312 IPR036264 -
Lan5g0605 431 PIRSF Amidohydrol_AmhX 24 417 IPR017439 GO:0016787
Lan5g0605 431 SUPERFAMILY Zn-dependent exopeptidases 32 414 - -
Lan5g0605 431 TIGRFAM amidohydrolases: amidohydrolase 37 400 IPR017439 GO:0016787
Lan5g0605 431 Gene3D - 203 321 - -
Lan5g0605 431 Pfam Peptidase dimerisation domain 204 301 IPR011650 -
Lan5g0605 431 PANTHER AUXIN CONJUGATE HYDROLASE 16 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0605 Lan-Chr5 12302129 12308232 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0605 K21604 K14664 gmx:100789077 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2124 6 31750283 31753842 Lan5g0605 5 12302129 12308232 PCT
Lan3g0216 3 1392831 1395943 Lan5g0605 5 12302129 12308232 PCT
Lan5g0605 5 12302129 12308232 Lan6g2124 6 31750283 31753842 PCT
Lan5g0605 5 12302129 12308232 Lan3g0216 3 1392831 1395943 PCT