Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2083 ATGGGTGCTTCTCTTCCTCCAAAAGAGGCCAATCTCTTCAAGCTTATTGTTAAATCCTATGAAACCAAACAATACAAAAAGGGCCTCAAAGCAGCCGATGCCATTTTGAAAAAATTTCCAGATCACGGAGAGACTTTATCAATGAAGGGTTTGACGTTGAATTGCATGGATCGTAAGTCTGAAGCATATGAACTTGTTCGCCAAGGGCTAAAGAATGACCTTAAAAGTCATGTTTGCTGGCATGTTTTTGGTCTCCTTTACCGGTCAGACAGAGAATACAGGGAAGCAATCAAGTGCTACCGAAATGCACTGAGAATAGATCCGGACAATCTTGAAATATTACGTGACCTATCACTCTTACAGGCACAAACGCGAGATTTAGCTGGCTTTGTTGAGACACGACAACAGCTTCTGACTCTCAAGTCAAACCATCGCATGAACTGGATTGGCTTTGCTGTTGCCCATCATTTAAACTCCAATGCATCAAAGGCAGTGGAAATCCTGGAAGCATATGAAGGGACCTTAGAAGATGATTTTCCTCCTGAAAATGAACGGTGTGAGCATGGGGAAATGCTTTTATATAAGATCTCTTTGTTAGAGGAATGTGGTTTTCTCGAGAGAGCTCTTGAGGAGTTGCACAAGAAGGAATTAGAAATTGTCGATAAGCTTGAATATAAAGAACAAGAGGTTTCTCTTTTGGTGAAGCTTGGTCGCTTTGAAGAAGGCGAGAAATTGTACCGGTCATTACTTTCCATGAATCCTGACAATTATAGATATTATGAGGGCCTCCAAAAATGTGTTGGATTATATTCAGAAAATGGTCATTTTTCTCCAGATGAAATAGATCGGTTAGATGCCTTGTACAAAGCACTGAGGGAGCAATTTAAGTGGTCTTCTGCTGTTAAGAGAATACCACTAGATTTTCTACAAGATGACAGATTTAAAGAAGCAGCAGATAGTTATATTCGGACTTTCCTGACTAAGGGAGTTCCATCTCTGTTCTCTGATCTTTCTTCTTTGTACAATCACCCTGGGAAGGCCGACATTTTGGAACGACTTATTCTTGAGTTAGAGAACTCAATTAGGACAACTGGTCAGTACCCCGGGAGGGTTGAAAAGGAGCCTCCATCAACTCTTATGTGGACTTTGTTCTTGTTGGCTCAGCATTATGACAGGCGGGGCCAATATGAAACTGCTCTTTCAAAAATCAATGAGGCTATAGAACACACACCTACTGTCATTGATCTATATTCTGTCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGGCTGCTGCTGCTGCATTAGCAGATGAAGCTAGGTGTATGGATCTTGCTGATCGTTATGTTAATAGTGAATGCGTTAAGCGTATGCTGCAGGCTGATCAGGTGGATTTGGCCGAAAAAACTGCTGTGTTGTTCACAAAAGAAGGGGATCAGCACACCAATCTCCATGATATGCAGTGCATGTGGTATGAGCTTGCCTCTGCTGAAAGCTATTACCGACAAGGCGATCTTGGATTAGCTCTCAAGAAATTTCTAGCAGTGGAGAAGCATTATGCAGATATCTCCGAAGATCAATTTGATTTTCATTCATACTGCTTAAGGAAAATGACATTGCGCACATATGTAGAAATGCTCAAGTTTCAAGACCGATTGCACTCACACACATATTTTCGTAAAGCAGCTGCTGGAGCTATCAGATGTTATATTAAACTGCATGATTCTCCTCCAAAGTCAACGACTGAGGAAGATGATGAAGCGTCCAAGTTGCTTCCTTCTCAGAAAAGGAAACTGAGGCAAAAACAGAGAAAGGCAGAAGCAAGAGCTAAGAAAGAGGCAGAAGAAAAAAATGAAGAATTCAGCGCTAGTGGGCCATCAAAGTCTGGGAAACGGCTTGCAAAACCTGTTGATCCTGATCCACGTGGGGAAACGTTGTTGCAGGTTAAAGATCCATTATCCGAAGCCACAAAATACTTGAAGTTGCTGCAGAAACATTCACCTGATTCATTGGAGACACACTTGCTCTCTTTTGAATTATATATGAGAAAACAGAAGGTTTTGCTTGCCTTCCAGGCTGTAAAGCAGTTGCTGAGGTTGGATGCTGAACATCCAGATTCTCATCGTTGCCTGATTAAATTCTTCCATAAAGTGGGATCCATCAATGCACCTGTGACGGACACTGAGAAACTCATTTGGGGTGTCTTAGAAGCTGAGCGTCAAACTATTAGTCAGCTGCATGGGAAATCTTTGTTTGAGGCTAATAACTCTTTCCTTGAAAAACATAAAGATTCTTTGACGCATAGAGCTGCTTTTGGAGAAATGTTGTACATTTTGGATCCCAACAGAAGGTCTGAGGCTGTCCAGTTGATTGAAGGGTCAAGAAATAATGTTGTGCAAAGCGAATGGAAACTTAAAGACTGTATTGCAGTTCATAAACTTCTTGGAACAGTGCTTGTTGATCAGGATGCGGCACTGAGATGGAAAGTGTGCTGCGCAGAGATTTTCTCCTACTCTACATACTTTGAGGGCAGCAACAGCTCTGCCTCTCCAAACTCTGTTCTGAATCAGATATGCAAGAGCACGGAAAACGGGAGTGCTAACCATTTGGTGGTTGATCATAAGGAGGAGTCAGTCATATCAAATGGGAAACTAGAGGCATTTAAAGATCTCACTATCTCACAAAATTGA 2691 0.4177 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVFGLLYRSDREYREAIKCYRNALRIDPDNLEILRDLSLLQAQTRDLAGFVETRQQLLTLKSNHRMNWIGFAVAHHLNSNASKAVEILEAYEGTLEDDFPPENERCEHGEMLLYKISLLEECGFLERALEELHKKELEIVDKLEYKEQEVSLLVKLGRFEEGEKLYRSLLSMNPDNYRYYEGLQKCVGLYSENGHFSPDEIDRLDALYKALREQFKWSSAVKRIPLDFLQDDRFKEAADSYIRTFLTKGVPSLFSDLSSLYNHPGKADILERLILELENSIRTTGQYPGRVEKEPPSTLMWTLFLLAQHYDRRGQYETALSKINEAIEHTPTVIDLYSVKSRILKHAGDLAAAAALADEARCMDLADRYVNSECVKRMLQADQVDLAEKTAVLFTKEGDQHTNLHDMQCMWYELASAESYYRQGDLGLALKKFLAVEKHYADISEDQFDFHSYCLRKMTLRTYVEMLKFQDRLHSHTYFRKAAAGAIRCYIKLHDSPPKSTTEEDDEASKLLPSQKRKLRQKQRKAEARAKKEAEEKNEEFSASGPSKSGKRLAKPVDPDPRGETLLQVKDPLSEATKYLKLLQKHSPDSLETHLLSFELYMRKQKVLLAFQAVKQLLRLDAEHPDSHRCLIKFFHKVGSINAPVTDTEKLIWGVLEAERQTISQLHGKSLFEANNSFLEKHKDSLTHRAAFGEMLYILDPNRRSEAVQLIEGSRNNVVQSEWKLKDCIAVHKLLGTVLVDQDAALRWKVCCAEIFSYSTYFEGSNSSASPNSVLNQICKSTENGSANHLVVDHKEESVISNGKLEAFKDLTISQN* 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2083 896 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 696 IPR021183 -
Lan6g2083 896 MobiDBLite consensus disorder prediction 577 594 - -
Lan6g2083 896 PIRSF NAT_A 1 815 IPR021183 -
Lan6g2083 896 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Lan6g2083 896 Gene3D - 2 503 - -
Lan6g2083 896 Pfam TPR repeat 84 121 - -
Lan6g2083 896 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 875 - -
Lan6g2083 896 Gene3D - 505 725 - -
Lan6g2083 896 SMART tpr_5 43 76 IPR019734 GO:0005515
Lan6g2083 896 SMART tpr_5 77 110 IPR019734 GO:0005515
Lan6g2083 896 SMART tpr_5 223 256 IPR019734 GO:0005515
Lan6g2083 896 SMART tpr_5 380 413 IPR019734 GO:0005515
Lan6g2083 896 MobiDBLite consensus disorder prediction 606 622 - -
Lan6g2083 896 SUPERFAMILY TPR-like 12 440 IPR011990 GO:0005515
Lan6g2083 896 Coils Coil 596 624 - -
Lan6g2083 896 MobiDBLite consensus disorder prediction 576 645 - -
Lan6g2083 896 PANTHER BNAC02G23120D PROTEIN 10 875 - -
Lan6g2083 896 ProSiteProfiles TPR repeat profile. 380 413 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2083 Lan-Chr6 31440363 31459256 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2083 K20792 - gmx:100776968 1529.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2083 6 31440363 31459256 Lan10g0228 10 1442915 1456026 LSH
Lan6g2083 6 31440363 31459256 Lan5g0565 5 11281073 11294946 PCT
Lan5g0565 5 11281073 11294946 Lan6g2083 6 31440363 31459256 PCT