Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1881 ATGGCTTCTGTAGATGCTAATCAACCATTATTACCCAACCATGATGAGCATTGTGAACTTGAAAATATACTCTCCGATACCACCTTACCTTTTCTCACTCGTCATGGAAAAGCTTTATGGATCGAATTGAAGCTTCTCTTCTTCTTAGCTGCTCCTGCTATTGTTGTTTATCTCATCAACTATCTCATGTCTATGTCCACCCAAATCTTCTCCGGCCACCTTGGTAATCTTGAACTTGCCGCGGCTTCACTTGGAAACTCCGGCATCCAAATCTTTGCCTATGGCATCATGTTAGGAATGGGAAGTGCAGTTGAGACATTATGTGGACAAGCATTTGGTGCTAACAAGTTAGGAATGTTAGGCATATACTTGCAAAGATCAACAGTACTTCTATCATTAGCTGGTGTTGTTGTAACAGTGATATATGTCTTTAGTGAACCAATTTTACTCTTTCTAGGACAAGCTCCAAATATTGCATCAGCTGCTGCATTATTTGTCTATGGCTTAATCCCTCAAATCTTTGCATATGCTATGAATTTCCCAATTCAAAAGTTTCTTCAATCACAAAGTATAGTGGCACCAAGTGCATACATTGCAGCAGCTACATTATTGGTGCACCTTTTGTTTAATTGGTTGGCTGTGTACAAGGTTGGGCTTGGTTTATTGGGTGCATCATTGGTGCTAAGTCTTTCATGGTGGATCATTGTGATTGCACAATTTGTGTACATTGTTAAGAGTGAAAGGTGTAAAAATACATGGCAAGGTTTCTCATGGGAAGCATTTACTGGTTTAACTGAATTTTTCAAGTTGTCAGTAGCATCTGCAGTTATGCTTTGCTTAGAGACTTGGTACTTTCAGATTTTGGTTTTACTTGCAGGGTTGCTTCCTCATCCTGAGTTGGCTCTTGATTCTCTTTCTATTTGTACCACAGTTTCTGGATGGGTGTTCATGATATCAGTTGGATTTAACGCAGCTGCAAGTGTGAGAGTGAGCAATGAACTAGGAGCAGGGAATCCAAAATCAGTGTCATTTTCTGTGATGGTGGTCACAGTCATTTCTTTCATTATATCAATCATTGTAGGACTTGTGGTGCTTGCATTAAGAGATGTTATTAGTTATCTCTTCACAGATGGTGAAGAAGTTGCTGCAGCAGTCTCAGATCTTTGTCCATTGCTAGCACTTGCTATTGTCCTCAATGGCATTCAACCCGTTTTATCAGGGGTTGCTGTGGGATGTGGTTGGCAATCTTTCGTGGCTTATGTAAATGTGGGTTGTTATTATGGAGTTGGCATTCCATTTGGTGCGATTCTTGGCTTTTATTTCAAGTTTGGTGCTAAGGGAATATGGTTGGGGATGCTAGGTGGCACTTCTATGCAAACATTGATTCTAATTTGGGTCACATTTCGAGCAGATTGGAATAAGGAGGTAGAAAATGCAGCTAAGAGGTTGAAGAAATGGGAGAACAACAAGGAGAAACTGTTTTTAAACTAA 1491 0.4004 MASVDANQPLLPNHDEHCELENILSDTTLPFLTRHGKALWIELKLLFFLAAPAIVVYLINYLMSMSTQIFSGHLGNLELAAASLGNSGIQIFAYGIMLGMGSAVETLCGQAFGANKLGMLGIYLQRSTVLLSLAGVVVTVIYVFSEPILLFLGQAPNIASAAALFVYGLIPQIFAYAMNFPIQKFLQSQSIVAPSAYIAAATLLVHLLFNWLAVYKVGLGLLGASLVLSLSWWIIVIAQFVYIVKSERCKNTWQGFSWEAFTGLTEFFKLSVASAVMLCLETWYFQILVLLAGLLPHPELALDSLSICTTVSGWVFMISVGFNAAASVRVSNELGAGNPKSVSFSVMVVTVISFIISIIVGLVVLALRDVISYLFTDGEEVAAAVSDLCPLLALAIVLNGIQPVLSGVAVGCGWQSFVAYVNVGCYYGVGIPFGAILGFYFKFGAKGIWLGMLGGTSMQTLILIWVTFRADWNKEVENAAKRLKKWENNKEKLFLN* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1881 496 TIGRFAM matE: MATE efflux family protein 52 449 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lan6g1881 496 Coils Coil 469 496 - -
Lan6g1881 496 CDD MATE_eukaryotic 42 478 IPR045069 GO:0042910|GO:1990961
Lan6g1881 496 PANTHER PROTEIN DETOXIFICATION 16 483 - -
Lan6g1881 496 PANTHER MULTIDRUG RESISTANCE PROTEIN 16 483 - -
Lan6g1881 496 Pfam MatE 52 212 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lan6g1881 496 Pfam MatE 274 435 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1881 Lan-Chr6 29897132 29903769 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1881 K03327 - gmx:100795338 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1881 6 29897132 29903769 Lan10g0031 10 174897 179171 LSH
Lan6g1881 6 29897132 29903769 Lan8g1540 8 22465920 22472094 PCT
Lan8g1540 8 22465920 22472094 Lan6g1881 6 29897132 29903769 PCT