Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0031 ATGGGTTCTGTTGATGGTCATGATCAACCACTCTTATCCAACCATAACCATGAACATCATCAACAACATGAACTAGAAAATATACTCTCCAACACCACCTTGCCTGTCCAAACTCGTCTTAGGAAAGCCTTATGGATTGAATCAAAGTATCTCTTTTTCTTGGCTGCTCCTGCTGTGGTTGTTTATCTCATCAACTATGTCATGTCCATGTCTACCCAAATCTTCTCCGGACACCTTGGTAATCTTGAACTCGCCGCCGCTTCCCTTGGCAACACTGGCATCCAAATCTTCGCTTATGGTCTCATGTTGGGTATGGGAAGTGCAGTTGAGACCCTATGTGGACAAGCTTTTGGTGCTAACAAGCTTGAAATGCTAGGTATATACATGCAAAGATCAGCAGTTCTTCTCTCATTGACTGGTGTTATTTTAACAGTGATATATGTGTTCAGTGGACCAATTTTAGTATTTCTTGGACAAGCTCCAAACATTGCATATGCTGCTGCTTTATTTGTGTATGGACTAATCCCTCAAATATTTGCATATGCTGTAAATTTTCCAATTCAAAAGTTTCTTCAAGCACAAAGCCTAGTGGCCCCAAGTGCATACATATCAGCAGCAACATTAGTGTTGCACCTCTTTTTGAGTTGGTTGGTTGTGTACAAGGTTGGACTTGGTTTACTAGGTGCCTCATTGGTGTTAAGTATTTCATGGTGGATCATTGTGATTGGACAATTTGTGTATATTTTGAAGAGTGAAAAGTGTAAGAATACATGGCAAGGGTTCTCATGGGAAGCCTTTACTGGATTACCTGAATTTTTCAAATTGTCAGCAGCATCAGCAGTTATGTTATGCCTAGAAACTTGGTACTTTCAGATTCTGGTTTTGTTAGCTGGGTTGCTTCCTCACCCTGAGTTGGCTCTTGATTCTCTATCTATTTGTACCACAATAATGGGATGGGTGTTCATGATCTCAGTTGGATTCAACGCAGCTGCAAGTGTGAGAGTGAGCAATGAACTAGGAGCAAGGAATCCAAGATCAGCCTCATTTTCAGTGGTGGTGGTGACTGCGATGTCTTTCATCATATCAGTTATTGCAGCAGTAGTGGTTCTTGCATTAAGAGATGTCATTAGTTATGTCTTCACAGAAGGTGAAGAAGTTGCTGCAGCTGTCTCAGATCTATGTCCATTGTTAGCACTTTCTCTTGTCCTAAATGGCATTCAACCTGTCTTATCTGGGGTGGCTGTTGGTTGTGGATGGCAAAGTTTCGTAGCTTATGTAAATGTAGCTTGTTATTATGGAGTTGGCATACCATTGGGTGCGGTTCTCGGCTTTTATTTCAAGTTTGGTGCTAAGGGAATATGGCTGGGAATGTTAGGTGGCACAACTATGCAAACGATTATTCTAATATGGGTCACATTCCGAACAGATTGGAATAAGGAGGTAAAAGACGCAGCTAAGAGGTTGGACAAATGGCAGAACAAGAATGACCAACATCTTCTAAACTAA 1506 0.413 MGSVDGHDQPLLSNHNHEHHQQHELENILSNTTLPVQTRLRKALWIESKYLFFLAAPAVVVYLINYVMSMSTQIFSGHLGNLELAAASLGNTGIQIFAYGLMLGMGSAVETLCGQAFGANKLEMLGIYMQRSAVLLSLTGVILTVIYVFSGPILVFLGQAPNIAYAAALFVYGLIPQIFAYAVNFPIQKFLQAQSLVAPSAYISAATLVLHLFLSWLVVYKVGLGLLGASLVLSISWWIIVIGQFVYILKSEKCKNTWQGFSWEAFTGLPEFFKLSAASAVMLCLETWYFQILVLLAGLLPHPELALDSLSICTTIMGWVFMISVGFNAAASVRVSNELGARNPRSASFSVVVVTAMSFIISVIAAVVVLALRDVISYVFTEGEEVAAAVSDLCPLLALSLVLNGIQPVLSGVAVGCGWQSFVAYVNVACYYGVGIPLGAVLGFYFKFGAKGIWLGMLGGTTMQTIILIWVTFRTDWNKEVKDAAKRLDKWQNKNDQHLLN* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0031 501 MobiDBLite consensus disorder prediction 1 24 - -
Lan10g0031 501 TIGRFAM matE: MATE efflux family protein 57 454 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lan10g0031 501 CDD MATE_eukaryotic 47 483 IPR045069 GO:0042910|GO:1990961
Lan10g0031 501 Pfam MatE 57 217 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lan10g0031 501 Pfam MatE 279 440 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lan10g0031 501 PANTHER MULTIDRUG RESISTANCE PROTEIN 19 488 - -
Lan10g0031 501 PANTHER PROTEIN DETOXIFICATION 19 488 - -
Lan10g0031 501 Coils Coil 474 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0031 Lan-Chr10 174897 179171 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0031 K03327 - gmx:100795338 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1881 6 29897132 29903769 Lan10g0031 10 174897 179171 LSH
Lan10g0031 10 174897 179171 Lan8g1540 8 22465920 22472094 PCT
Lan8g1540 8 22465920 22472094 Lan10g0031 10 174897 179171 PCT