Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1791 ATGATGCTTTTTCCATATGGGTTGGTATTGTTGCCTCTTATAATTTATGTTCTTATGATATGCAGAATGGCCAAAGCTGAATACACGTTAGATTCAGTGAGAGGTGCTTTGATTAGGGAAGAAGATACCATAATTTATGGCCTAATTGAGAGGGCTAAGTTCCCTACCAATTCTCAAACTTACACTCATAACTACACTGGAATCCCAGGCTTTTCTGGTTCATTGCTTCATTTTGTTGTTATCAATACTGAGGCTGTTCAAGCTAAGGCTGGAAGATACAAAAACCTTGAAGAAAATCCATTCTTCCCAGAAAATTTACCACCCTCACTTGTGACATCTTACCCCTTCACACAGTTTTTACATGCTGGAACTGCTTCGATTAACATAAATAAGTCCATCTGGAAATTGTACATTCATGAGTTGCTTCCATTGTTTGTTGCTTCTGGTGATGATGGCAACTATGCACAAACTGCAGCTAGTGATCTTTCATTATTGCAGGCCATATCTAGAAGGATTCATTATGGAAAGTTTGTAGCTGAGGTGAAATTCAGGGAGTCTCCTCAAGACTATGAACCTTTAATTCGTGCTAAGGATACAGAAGGATTGATGAAATTGTTAACATTTGAGAGTGTTGAAGAAATGGTGAGAAAGAGAGTTGAAAAGAAGGCCATGCTATATGGAAAGGATGTGACCCTCAACAATGATGATGATGATAATGACGGTAATATAAAGAAATACAAGGTTGATCCATCAGTGGCTTCTACCTTGTACAAGAAATGGTTAATACCTCTCACCAAGGATGTTCAGGTTGAGTACCTCTTGAACCGCCTTGATTGA 837 0.3847 MMLFPYGLVLLPLIIYVLMICRMAKAEYTLDSVRGALIREEDTIIYGLIERAKFPTNSQTYTHNYTGIPGFSGSLLHFVVINTEAVQAKAGRYKNLEENPFFPENLPPSLVTSYPFTQFLHAGTASININKSIWKLYIHELLPLFVASGDDGNYAQTAASDLSLLQAISRRIHYGKFVAEVKFRESPQDYEPLIRAKDTEGLMKLLTFESVEEMVRKRVEKKAMLYGKDVTLNNDDDDNDGNIKKYKVDPSVASTLYKKWLIPLTKDVQVEYLLNRLD* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1791 278 PANTHER CHORISMATE MUTASE 20 278 - -
Lan6g1791 278 TIGRFAM CM_pl-yst: chorismate mutase 29 278 IPR008238 GO:0004106|GO:0009073
Lan6g1791 278 PANTHER CHORISMATE MUTASE 20 278 IPR008238 GO:0004106|GO:0009073
Lan6g1791 278 ProSiteProfiles Chorismate mutase domain profile. 21 278 IPR008238 GO:0004106|GO:0009073
Lan6g1791 278 SUPERFAMILY Chorismate mutase II 27 278 IPR036263 GO:0046417
Lan6g1791 278 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 23 278 IPR037039 GO:0004106|GO:0009073
Lan6g1791 278 PIRSF Chor_mut_AroQ_eu 19 278 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1791 Lan-Chr6 29263347 29266105 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1791 K01850 - gmx:100791341 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1791 6 29263347 29266105 Lan3g1726 3 29797081 29799536 LSH
Lan6g1791 6 29263347 29266105 Lan3g1110 3 23461211 23463573 PCT
Lan3g1110 3 23461211 23463573 Lan6g1791 6 29263347 29266105 PCT