Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1110 ATGGTGAAAGGTGAATACACATTAGACTCATTGAGATCAAGTTTAGTTAGACAAGAAGACACTATCATATTTGGTCTCATTGATAGGGCTAAGTTCCCATTCAATTCTCCTACTTACACAACTTTGATTCCACATTTTTCTCTCTCATTGCTTCAGTTTCTTGTTCATAATATAGAGGCCATTCATGCTCAGGCAGGTAGATATAATAGCCCTGAAGAAACCCCTTTCTTCCCAGAAAATTTACCACCCTCAATTGTACCAAACCACACCTTCTCACAATTTTTGCGTCCTGCAGCTGCTTCCATTAACATAAACAAGTTCATATGGAAAATGTACTTTCATGAGCTGCTTCCAATTTTTGTTGCTTCTGGTGATGATGGCAACTATGCACAAACTGCAGCTAGTGATCTTTCATTATTGCAGGCTATCTCTAGAAGGATTCATTATGGAAAATTTGTAGCCGAGGCCAAATTTAGGGAATCTCCTAAAGACTATGAGCCTTTAATTCGTGCTAAGGATAGAGAAGCATTGATGAAATTGTTAACATCTAAGAGTGTAGAAGAGATGGTGATAAAGAGGGTTGAAAAGAAGGCAATGGTGTTTGGACAAGAAGTTAGTGTTGATAATGTTGTGAAGGGAAAATATAAAGTTGATCCATTAATGGTTTCTCACTTGTATAAAAAATGGTTAATACCCCTTACAAAGATTGTTGAAGTGGAATACTTCCTACACCTTCTTGATTAA 744 0.3683 MVKGEYTLDSLRSSLVRQEDTIIFGLIDRAKFPFNSPTYTTLIPHFSLSLLQFLVHNIEAIHAQAGRYNSPEETPFFPENLPPSIVPNHTFSQFLRPAAASININKFIWKMYFHELLPIFVASGDDGNYAQTAASDLSLLQAISRRIHYGKFVAEAKFRESPKDYEPLIRAKDREALMKLLTSKSVEEMVIKRVEKKAMVFGQEVSVDNVVKGKYKVDPLMVSHLYKKWLIPLTKIVEVEYFLHLLD* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1110 247 PANTHER CHORISMATE MUTASE 5 247 - -
Lan3g1110 247 PANTHER CHORISMATE MUTASE 5 247 IPR008238 GO:0004106|GO:0009073
Lan3g1110 247 TIGRFAM CM_pl-yst: chorismate mutase 7 247 IPR008238 GO:0004106|GO:0009073
Lan3g1110 247 PIRSF Chor_mut_AroQ_eu 3 247 IPR008238 GO:0004106|GO:0009073
Lan3g1110 247 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 2 247 IPR037039 GO:0004106|GO:0009073
Lan3g1110 247 ProSiteProfiles Chorismate mutase domain profile. 1 247 IPR008238 GO:0004106|GO:0009073
Lan3g1110 247 SUPERFAMILY Chorismate mutase II 6 247 IPR036263 GO:0046417
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1110 Lan-Chr3 23461211 23463573 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1110 K01850 - gmx:100791095 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1791 6 29263347 29266105 Lan3g1110 3 23461211 23463573 PCT
Lan3g1726 3 29797081 29799536 Lan3g1110 3 23461211 23463573 PCT
Lan3g1110 3 23461211 23463573 Lan6g1791 6 29263347 29266105 PCT
Lan3g1110 3 23461211 23463573 Lan3g1726 3 29797081 29799536 PCT