Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1726 ATGATGGTTTATCAATTTGGGTGGGTATTGGTTCTTATAATATGTAGTATTGTGAGATGCAGAATGGCAGAAGGTAATTACACATTGGATTCAGTGAGAGATGTTTTGGTTAGGGAAGAAGATATCATCATCTTTGGTCTTATTGAAAGGGCTAAGTTCCCTCTCAACTTCAACGCTTATAACAAAAACTACTTTAATATCCCATCTTTTGCTCTCACATTGCTCCACTTTGTTGCTATCGATACAGAAGCTCTTCAAGCTAAGGGTGGAAGATACGGAAACCCAGAAGAAAATCCCTTCTTTCCAGAAAAGTTACCACCCTCATTTGTAACACCTTACCCCTTCACAAAGTTTTTGCATGCTGGAGGAGCTTCCATAAACATAAACAAATCCATCTGGAAATTTTACCTTGATGAGTTTTTGAGTAAATGGTTTGATGTTTTGGGTGATGATGGAAACTATGCACAAACTGCAGCTAGTGACTTTTCATTATTGCAGGCCATCTCTAGAAGGATTCATTATGGAAAGTTTGTAGCTGAGGTGAAATTCAGGGATTCTCCTAAAAAATATGAGCCTCTAATTTGTGCTAAGGATAAAAAAGGAATAGAGAAATTATTGACAGATACAAGTGTTGAAGAAAAGGTGATAAAGAGAGTTGAAGAGAAGGCCAGGGTATATGGGATGTATGTGACACTTAACAAAGGTAATAAGAATGGAACAAAATACAAAGTTGATCCATTAGTGGTTTCTACTTTGTACAAGAAATGGTTAATACCTCTTACCAAGAGTGTTGAAGTTGAGTACCTCTTGCACCGTCTAGATTGA 825 0.3697 MMVYQFGWVLVLIICSIVRCRMAEGNYTLDSVRDVLVREEDIIIFGLIERAKFPLNFNAYNKNYFNIPSFALTLLHFVAIDTEALQAKGGRYGNPEENPFFPEKLPPSFVTPYPFTKFLHAGGASININKSIWKFYLDEFLSKWFDVLGDDGNYAQTAASDFSLLQAISRRIHYGKFVAEVKFRDSPKKYEPLICAKDKKGIEKLLTDTSVEEKVIKRVEEKARVYGMYVTLNKGNKNGTKYKVDPLVVSTLYKKWLIPLTKSVEVEYLLHRLD* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1726 274 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 22 274 IPR037039 GO:0004106|GO:0009073
Lan3g1726 274 SUPERFAMILY Chorismate mutase II 25 274 IPR036263 GO:0046417
Lan3g1726 274 PIRSF Chor_mut_AroQ_eu 18 274 IPR008238 GO:0004106|GO:0009073
Lan3g1726 274 PANTHER CHORISMATE MUTASE 18 274 IPR008238 GO:0004106|GO:0009073
Lan3g1726 274 TIGRFAM CM_pl-yst: chorismate mutase 28 274 IPR008238 GO:0004106|GO:0009073
Lan3g1726 274 PANTHER CHORISMATE MUTASE 18 274 - -
Lan3g1726 274 ProSiteProfiles Chorismate mutase domain profile. 20 274 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1726 Lan-Chr3 29797081 29799536 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1726 K01850 - gmx:100791095 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1791 6 29263347 29266105 Lan3g1726 3 29797081 29799536 LSH
Lan3g1726 3 29797081 29799536 Lan3g1110 3 23461211 23463573 PCT
Lan3g1110 3 23461211 23463573 Lan3g1726 3 29797081 29799536 PCT