Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0469 ATGGCTGCTTTGCAATACTTGGATACGTTACGGAACTCGCACCCTGAACTCTCCGATTGGTACAATTCTCTTGCAGATCTGTACCAGAAGAAGCTATGGCACCAGCTTACTCTCAAGCTCGAACAGTTCGTTGCTCTCGCTGTTTTTCAGGCCGGTGATGCTCTTATACAGTTATATAACAATTTCATCACTGACTTTGAGACAAAAATCAACCTTCTCAAGCTTGCACATTTTGCTGTGATAGTTTCTCGTCAGTATGCTGAGAAAGAAGCTGCTGTTGGTTATCTTGACGGAATCATTGAGAAGCTTCAAGCCACTAGAGAACAGCGAATTGAAGAACCTATTCTTTACATTAAGATGCAAATAGCAATATTTAAGCTTGAGCAGGGTGACCAGAAGGAGTGCAAGAAACTTCTAGAAGATGGAAAAAGTACACTTGACAGCATGACAGATATTGACCCATCTGTGTATGCTAGCTACTACTGGGTATCATCCCAGTATCATAAGTCCCGCCAGGAATTTGCCGAGTTCTACAAAAGTGCTCTTCTCTATTTGGCATACACATCAGTGGAGTCTCTCTCAGATTCATTCAAGCTGGATCTGGCATTTGATTTGTCCCTTTCTGCTTTGCTGGGGGATAACATCTACAACTTTGGGGAGCTACTTGCGCATCCTATAATTAAGAGCCTTCTGGGGACAAAGGTGGAATGGCTTTACTATATTCTGCAGGCATTTAATTCTGGTGATTTAGTTCGATATCAAGAATTATGTCGGGTTCATAATGCTGCTTTACGGGCTCAACCAGCACTAGTTCAAAATGAACAGAGGTTGTTAGAAAAGGTTAATATTCTCTGCCTGATGGAGATTATATTCAGTCGGCCTTCCGAAGATAGAACCATTCCCTTGAGTGTGGTTGCAGACCGTACAAAACTTTCTATAGAGGATGTGGAGCATCTCCTGATGAAGAGCCTATCTGTTCACCTAATTGAGGGTATAATTGATCAAGTTGAGGGGACAGTGCATGTTTCCTGGGTGCAGCCAAGAGTTCTGGGAATTCAACAGGTCAAATCCTTACGGGATCGACTGGATGGTTGGACAGAAAAAGTACACACTGCGTTGTTGTCCATCGAAGCAGAAACACCTGATTTGATTGGATCATGA 1161 0.4281 MAALQYLDTLRNSHPELSDWYNSLADLYQKKLWHQLTLKLEQFVALAVFQAGDALIQLYNNFITDFETKINLLKLAHFAVIVSRQYAEKEAAVGYLDGIIEKLQATREQRIEEPILYIKMQIAIFKLEQGDQKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQYHKSRQEFAEFYKSALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALRAQPALVQNEQRLLEKVNILCLMEIIFSRPSEDRTIPLSVVADRTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQQVKSLRDRLDGWTEKVHTALLSIEAETPDLIGS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0469 386 PANTHER PROTEASOME COMPONENT (PCI) DOMAIN PROTEIN-RELATED 1 385 - -
Lan6g0469 386 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 272 365 - -
Lan6g0469 386 SUPERFAMILY "Winged helix" DNA-binding domain 275 348 IPR036390 -
Lan6g0469 386 SMART PINT_4 272 365 IPR000717 -
Lan6g0469 386 ProSiteProfiles PCI domain profile. 174 347 IPR000717 -
Lan6g0469 386 Pfam PCI domain 238 343 IPR000717 -
Lan6g0469 386 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 1 385 IPR035298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0469 Lan-Chr6 3891458 3896773 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0469 K03039 - gmx:100804455 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0507 17 3939551 3945229 Lan6g0469 6 3891458 3896773 LSH
Lan18g0796 18 13399602 13404737 Lan6g0469 6 3891458 3896773 LSH