Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0507 ATGGCTGCTCTGCAATACTTGGATTCGTTGCGGAACTCGCACCCTGAACTTTCTGATTGGTATAATTCCCTCGCAGATCTCTACCAGAAGAAGCTATGGCATCAGTTAACTCTCAAGCTCGAACAGTTCGTTGCTCTCGCTGTTTTCCAGGCTGGTGATGCTCTTGTACAGTTATATCACAATTTCATCACTGACTTTGAGACAAAAATCAACCTTCTCAAGCTTGCGCATTTTGCTGTGATAGTTTCTCGTCAGTATTCTGAGAAAGAAGCTGCTATTGGTTATCTTGAAGGAATCATCGAGAAGCTTCAAGCCACTAGAGAACAACGAATTGAAGAACCTATTCTTTACAGTAAGATGCAAATAGCAATATTTAAGCTTGACCAGGGTGACCAGAAGGAATGCAAGAAACTTCTAGAAGATGGAAAGAGTACTCTTGACAGCATGACAGACATTGATCCATCTGTGTATGCTAGCTACTACTGGGTATCATCCCAGTATCACAAAACCCGCCAAGAATTCGCTGAGTTCTACAAAAGTGCCCTTCTCTATTTGGCATACACATCAGTGGAGTCTCTGTCAGATTCATTCAAGCTGGATTTGGCATTTGATTTGTCCCTTTCTGCGTTGCTGGGGGATAACATCTACAATTTTGGAGAGCTACTTGCACATCCTATTATTAAGAGCCTTCTTGGGACAAAGGTGGAATGGCTATACTATATTCTGCAGGCATTCAATTCTGGTGATTTAGTTCGATATCAGGAGTTATGCCAGGTGCATAATGCTGCTTTAAGGGCTCAACCAGCACTAGTTCAAAATGAACAGAGGTTGCTGGAAAAGATTAACATTCTCTGTCTGATGGAGATTATATTCAGTCGACCTTCGGAAGATAGAACTATTCCCTTGAGTGTAATTGCAGATCGTACGAAACTTTCTATAGAGGATGTGGAGCATCTACTCATGAAGAGCCTATCTGTTCACCTAATTGAGGGTATAATTGATCAAGTTGAGAGCACAGTGCATGTTTCCTGGGTGCAGCCAAGAGTTCTGGGAATTCAACAGGTCAAATCCTTACGCGATCGACTGGACGGTTGGACAGAAAAAGTACACACTGCATTGTTGTCCATCGAGGCAGAAACACCTGATTTGATCGGATCATGA 1161 0.4246 MAALQYLDSLRNSHPELSDWYNSLADLYQKKLWHQLTLKLEQFVALAVFQAGDALVQLYHNFITDFETKINLLKLAHFAVIVSRQYSEKEAAIGYLEGIIEKLQATREQRIEEPILYSKMQIAIFKLDQGDQKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQYHKTRQEFAEFYKSALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYYILQAFNSGDLVRYQELCQVHNAALRAQPALVQNEQRLLEKINILCLMEIIFSRPSEDRTIPLSVIADRTKLSIEDVEHLLMKSLSVHLIEGIIDQVESTVHVSWVQPRVLGIQQVKSLRDRLDGWTEKVHTALLSIEAETPDLIGS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0507 386 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 1 384 IPR035298 -
Lan17g0507 386 SMART PINT_4 272 365 IPR000717 -
Lan17g0507 386 ProSiteProfiles PCI domain profile. 174 347 IPR000717 -
Lan17g0507 386 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 272 365 - -
Lan17g0507 386 Pfam PCI domain 238 343 IPR000717 -
Lan17g0507 386 SUPERFAMILY "Winged helix" DNA-binding domain 274 348 IPR036390 -
Lan17g0507 386 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 HOMOLOG B-LIKE 1 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0507 Lan-Chr17 3939551 3945229 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0507 K03039 - gmx:100804455 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0507 17 3939551 3945229 Lan18g0796 18 13399602 13404737 LSH
Lan17g0507 17 3939551 3945229 Lan6g0469 6 3891458 3896773 LSH