Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0329 ATGATGATGCATATGACCGCCGCCGCCACCGTACCAGCTCACAAGTTTCAGTTTCAGGGAAGATGCCCCAGCTTCAGATTCAGATGCCAATCCTCTTCCATCAAACTACCTTCAACCACCGACTCCACACGGTTGCACCTCAACAACCTCAACCACCTCTTGGAGAAACAAAACCCTCTTCATGTCCCCGCCACTCAACACCACCACAAATCACAGCACAACGAGTCTTCGATGGATAACAACAAGAAAGGAAGAAGCTTTCTTGAAAACCTTATCTGGCCGGAGATGAAAGCCGCCGATGAAATGTCTCCCGGACATCTTCACCGTCTGCAGCGTCTGCTCTCCATGACGGCGGAGTATTCTCCAAGAAACGTCATCGGAAACCGGTGGATGGAATACCATGGCAGCAACGATTGGAAAGGGATGCTTGATCCCCTGGATGAAAATCTCCGGCGAGAAGTTATCAGGTACGGCGAGTTTGTTCAAGCAGCGTATCACGCTTTCCACTCAGATCCCGGCATGTCACAAACGGAGCCGCCAAAGAAGACCCAACACGTGGCGTTATCTGACAGCTCATACAGGGTTACAAAGAGCCTCTATGCCACGTCATCTATCGGGTTACCCAAATGGGTCGATGATGTAGCTCCTGATCTTGGTTGGATGACTCAGCGATCCAGCTGGATCGGATACGTCGCCGTTTGTGAAGACAGAAGGGAAATTGCAAGGATGGGAAGGAGAGACATTGTGATCTCTCTACGTGGAACTTCCACGTGTCTTGAATGGGCCGAGAATGTCAGGGCTCAATTGATCGACATCCCTGAAAATGATTCAAAAGCCCAAGCCCAAGCCCAAGCCCAAGCCCAAGGAAAGCCTAAAGTTGAGTGTGGGTTCTTGAGCTTATACAAGACCAGAGGAGCTCATGTGCCTAGCTTATCAGAATCAGTGGTGGAAGAGGTGAAACGACTAATGGATGTATACAAAGGTGAAAAATTAAGCATAACTGTTACCGGGCATAGCCTTGGTGCTACTCTAGCATTGTTAGTGGCTGATGAGATAAGCACGTGCACACAAGATGTTCCACCGGTCGCGGTTTTTTCTTTTGGTGGGCCTCGTGTTGGTAACAAGGCTTTTGGAAATCGCATTACAACAAAAAATGTTAAAGTGCTAAGAATAGTTAACTCTCAAGATGTGATTACTAGGGTTCCAGGCATATTTGTTAGTGAAGAGCTTGAGCAAAAAATTAAAAATTCTAAGGTTGGTAATATGGTAGACATGTTAGAACAGAATACACCGTTGGGGTACTCACATGTTGGAGCCGAGCTACGTGTCGACACTAAAATGTCGCCATACCTGAAGCCGGATGCTGACATGGCTTGCTGTCATGACTTGGAGGCTTACTTGCACTTGGTGGATGGATTCATGGCATCTAATTGTCCATTCAGGTCAAATGCTAAGAGGAGTTTGGCTAGATTAATGCAAGATCAAAGCTCTAATGTAAAAAAGTTATATATTAGTAAGGCAAAAGGCTTGACATTGAATTTCAAGAAGCAAGGTTCCATGTCAATGCCTAGTTGTTTGCCTAGTCCATCTTAA 1593 0.4652 MMMHMTAAATVPAHKFQFQGRCPSFRFRCQSSSIKLPSTTDSTRLHLNNLNHLLEKQNPLHVPATQHHHKSQHNESSMDNNKKGRSFLENLIWPEMKAADEMSPGHLHRLQRLLSMTAEYSPRNVIGNRWMEYHGSNDWKGMLDPLDENLRREVIRYGEFVQAAYHAFHSDPGMSQTEPPKKTQHVALSDSSYRVTKSLYATSSIGLPKWVDDVAPDLGWMTQRSSWIGYVAVCEDRREIARMGRRDIVISLRGTSTCLEWAENVRAQLIDIPENDSKAQAQAQAQAQGKPKVECGFLSLYKTRGAHVPSLSESVVEEVKRLMDVYKGEKLSITVTGHSLGATLALLVADEISTCTQDVPPVAVFSFGGPRVGNKAFGNRITTKNVKVLRIVNSQDVITRVPGIFVSEELEQKIKNSKVGNMVDMLEQNTPLGYSHVGAELRVDTKMSPYLKPDADMACCHDLEAYLHLVDGFMASNCPFRSNAKRSLARLMQDQSSNVKKLYISKAKGLTLNFKKQGSMSMPSCLPSPS* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0329 530 PANTHER GLYCEROLIPASE A1 5 516 - -
Lan6g0329 530 CDD Lipase_3 181 471 - -
Lan6g0329 530 SUPERFAMILY alpha/beta-Hydrolases 222 473 IPR029058 -
Lan6g0329 530 Pfam Lipase (class 3) 249 404 IPR002921 GO:0006629
Lan6g0329 530 Gene3D alpha/beta hydrolase 129 522 IPR029058 -
Lan6g0329 530 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 5 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0329 Lan-Chr6 2538727 2540521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0329 26 530 Acyl Lipid Metabolism Gene Families AT4G16820 55.278 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0329 - - gmx:100806573 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0409 17 3027036 3028790 Lan6g0329 6 2538727 2540521 LSH
Lan6g0329 6 2538727 2540521 Lan20g0368 20 2558439 2563415 PCT