Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0409 ATGATGATGCAGATGAGCTCCGCCGCCACCGTACCAGCTCACAAGTTTCAGTTTCAAGCAAGATGTCCAAGCTTCAGATTCATATGCCAATCCTCCTCCATCAAACCACCGTCAACCACCGACTCCACACGGTTACACCTTTCCAACCTCAACAACATCCTAGAGAAACAAAACCCTCTTAGTATCCCCACCACCAAACAGCAACAACAACCGATCCACAATAACGAGTCAAAGGATAATAACAAGAAAGGAAGAAGCATGCTTGAAAACCTCAACCTTGGAGGACTATGGCCGGAGATGAGAGCCGCCGATGAAATGTCCCCCGGACACCTCCACCGCCTGCAGAGGCTGCTCTCAATGACGGCGGAATATTCTCCAAGAAACGTTATCGGAAGCAGGTGGATGGAATACCACGGAAGCAACGATTGGAAAGGGATGCTTGATCCCCTCGATGAAAATCTCCGGCGAGAGGTTATCAGGTACGGCGAGTTTGTTCAAGCAGCATATCACGCTTTCCACTCAGATCCCGCCATGTCACAAACGGAGCCACCAAAGAAAACCCATCACGTGGCATTATCTGACAGCTCATACAAGGTTACAAAGAGCCTCTATGCCACGTCATCTATTGGGTTACCCAAATGGGTGGATGATGTTGCTCCGAGTTTGAGTTGGATGACTCAGCGATCTAGTTGGGTTGGATACGTCGCCGTTTGTGAAGACAGAAGGGAAATTGCTAGAATGGGAAGGAGAGATATTGTGATCTCTCTTCGTGGAACTTCCACGTGTCTTGAATGGGCCGAAAATGCGAGGACCCATTTAATTGACATATCAAAAAATGATTCAAAAGCCCAAGGAAAGCCCAAAGTTCAGTGTGGGTTCTTGAACCTATACAAGACCAAAGGGGCTCACGTGCCTAGTTTATCAGAATCAGTGGTGGAAGAAGTGAAACGACTAATAGATATTTACAAAGGTGAAAAGCTAAGCATAACGGTTACAGGACATAGCCTTGGTGCTACACTTGCATTGTTGGTGGCTGATGAGATAAGCACGTGCAGGCCTGATGTACCACCAGTTGCTGTTTTTTCTTTTGGTGGGCCTCGTGTGGGTAATAAAGCCTTTGGGAATCGTATTACCGCAAAAAATGTGAAAGTATTAAGAATAGTGAACTCTCAAGACGTGATTACTAGAGTCCCGGGTATATTTGTTAGTGAAGAGCTTGAACAAAAAATTAAGAACTCTAAGGTGAATGGTGTGGTGGATATGTTAGAACAAAACACACCATTAGGATACTCACATGTTGGAACTGAGCTACGTGTCAATACTAAGATGTCGCCATACCTTAAGCCCGATGCTGACATGGCTTGTTGTCATGACTTGGAGGCTTACTTGCACTTGGTGGATGGGTTCATAGCATCAAATTGTCCATTCAGGTCAAATGCCAAGAGGAGTTTGGCTAGATTAATGCAAGATCAAAGCTCTAATGTAAAAAAGTTATATATTAGTAAGGCAAAAGGCTTGACCGTGAATTTCAAGCGACAAGAATCCATGTCTATGCCTACTTGTTTGCCTAGTCCATCTTAA 1581 0.4503 MMMQMSSAATVPAHKFQFQARCPSFRFICQSSSIKPPSTTDSTRLHLSNLNNILEKQNPLSIPTTKQQQQPIHNNESKDNNKKGRSMLENLNLGGLWPEMRAADEMSPGHLHRLQRLLSMTAEYSPRNVIGSRWMEYHGSNDWKGMLDPLDENLRREVIRYGEFVQAAYHAFHSDPAMSQTEPPKKTHHVALSDSSYKVTKSLYATSSIGLPKWVDDVAPSLSWMTQRSSWVGYVAVCEDRREIARMGRRDIVISLRGTSTCLEWAENARTHLIDISKNDSKAQGKPKVQCGFLNLYKTKGAHVPSLSESVVEEVKRLIDIYKGEKLSITVTGHSLGATLALLVADEISTCRPDVPPVAVFSFGGPRVGNKAFGNRITAKNVKVLRIVNSQDVITRVPGIFVSEELEQKIKNSKVNGVVDMLEQNTPLGYSHVGTELRVNTKMSPYLKPDADMACCHDLEAYLHLVDGFIASNCPFRSNAKRSLARLMQDQSSNVKKLYISKAKGLTVNFKRQESMSMPTCLPSPS* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0409 526 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 3 512 - -
Lan17g0409 526 CDD Lipase_3 185 467 - -
Lan17g0409 526 PANTHER GLYCEROLIPASE A1 3 512 - -
Lan17g0409 526 Gene3D alpha/beta hydrolase 133 517 IPR029058 -
Lan17g0409 526 MobiDBLite consensus disorder prediction 62 86 - -
Lan17g0409 526 SUPERFAMILY alpha/beta-Hydrolases 156 469 IPR029058 -
Lan17g0409 526 Pfam Lipase (class 3) 253 400 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0409 Lan-Chr17 3027036 3028790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0409 26 526 Acyl Lipid Metabolism Gene Families AT4G16820 56.117 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0409 - - gmx:100806573 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0409 17 3027036 3028790 Lan6g0329 6 2538727 2540521 LSH
Lan17g0409 17 3027036 3028790 Lan20g0368 20 2558439 2563415 PCT