Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0368 ATGAGGCTGGGCGGAGAAATCTCAGAAGAAGAACGAAAAGAAGAGGAAGAAGTTGGAACGACGGCGTTTTCAACTGGCGAATGTTGTGGGCAGAATAAAGTGGTGGTTGGTTACGCCTTAACGTCCAAGAAAAAAAATAGCTTTTTGCAGCCAAAGCTCACCACTCTTGCACGGAACAAGGGGATATACTTTGTTGCCATTGATCTAAACAAGCCGCTGCTAGAACAAGGGCCTTTTGATATTGTCTTGCATAAGTTGTCTGGGGAGGAATGGCATGAGATTATTGAGGATTACAGGCAAAAACATCCAGAGGTTAACGTCCTTGATCCTCCAGATGCTATTCAACATTTACACAACCGCCAATCCATGCTGCAAGTTGTGGTGGATCTAAACTTATCTGACTGCCATGGCAAGGTTGGTATTCCGCGACAGTTAGTTATCACAAAAGAGAAAAATCCATCCGAGATCCCTTACGAAGTCAGTAAAGCTGGGATGAAGTTGCCATTAGTTGCAAAACCACTACTTGTGGATGGCAGTGCAAAGTCACATGAATTATTTCTTGCTTATGATGAATCCTCTCTTTCAGAGCTTGAACCTCCACTGGTACTGCAAGAGTTTGTCAATCATGGTGGTATTCTCTTTAAGATTTATATTGTTGGGGAAACCATAAAGGTTGTGAGGCGTTTCTCTCTGCCTAATATCAGTAAACGCGAGTTGTCAAAGGTTGCAGGCGTCTTCCGTTTCCCAAGAGTTTCATGTGCTGCAGCTTCTGCGGACGATGCTGATCTAGATCCTAGTATTGCTGAACATCCACCAAGACCATTGTTGGAGAGGCTTGCAAAGGAGCTCCGCCATCGATTGGGACTCTGCTTGTTCAACATAGATATGATTCGGGAATATGGGACGACGGATGTGTTCTATGTCATTGATATCAACTACTTTCCTGGATATGGAAAGATGCCAGAGTATGAGCACATATTCACGGATTTTCTACTTAGCTTAGTGCAGTGCAAGATTAAGATGAAACCTGCTACCTAA 1038 0.4364 MRLGGEISEEERKEEEEVGTTAFSTGECCGQNKVVVGYALTSKKKNSFLQPKLTTLARNKGIYFVAIDLNKPLLEQGPFDIVLHKLSGEEWHEIIEDYRQKHPEVNVLDPPDAIQHLHNRQSMLQVVVDLNLSDCHGKVGIPRQLVITKEKNPSEIPYEVSKAGMKLPLVAKPLLVDGSAKSHELFLAYDESSLSELEPPLVLQEFVNHGGILFKIYIVGETIKVVRRFSLPNISKRELSKVAGVFRFPRVSCAAASADDADLDPSIAEHPPRPLLERLAKELRHRLGLCLFNIDMIREYGTTDVFYVIDINYFPGYGKMPEYEHIFTDFLLSLVQCKIKMKPAT* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0368 345 PIRSF ITPK 8 345 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Lan20g0368 345 MobiDBLite consensus disorder prediction 1 20 - -
Lan20g0368 345 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 110 319 - -
Lan20g0368 345 MobiDBLite consensus disorder prediction 1 21 - -
Lan20g0368 345 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 2 1 342 - -
Lan20g0368 345 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 35 114 IPR041429 -
Lan20g0368 345 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 136 332 IPR040464 -
Lan20g0368 345 Gene3D - 110 316 - -
Lan20g0368 345 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 1 342 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0368 Lan-Chr20 2558439 2563415 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0368 K00913 - gmx:100779381 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0409 17 3027036 3028790 Lan20g0368 20 2558439 2563415 PCT
Lan6g0329 6 2538727 2540521 Lan20g0368 20 2558439 2563415 PCT