Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1272 ATGGCAATCAAAGAGCCACTTATTCAGGAACATAAAAACAATCCTTGGATGGTTTACTTCACTACTTTTGTCGCAGTCTGTGGTTCTTATGAATTTGGAGCATGTGCCGGCTATTCATCTCCCACTCAATATGCTATCACACAGGATCTGAGTCTCTCTTTGGCAGAGTATTCCTTGTTCGGCTCCATCTTGACTTTCGGTGCGATGTTAGGTGCAATAACAAGTGGTCCTGTTGCTGATTTTATTGGACGAAAAGGGTCAATGAGAGTGTCAAGTGCTTTCTGTGTTGCAGGATGGCTAGTTATTTACTTTTCTGAGGGTCCAGTGCCTTTGGACATCGGGAGGTTAGCAACAGGATATGGAATGGGAGTTTTTTCATTTGTGGTTCCTGTCTTCATAGCAGAAATTGCACCAAAAGATCTCCGAGGGGCACTAACTACCTTAAATCAGTTCATGATCGTAGCTGGTGTGTCTGTGTCATATGTGATTGGAACAATACTTTCATGGAGAGCTTTAGCATTAACTGGCCTCATTCCTGCTGCTGTATTGCTTTTGGGTCTGTTTTTAATTCCGGAGTCTCCTAGATGGCTGGCAAAGAGAGGACGTGAAAAAGATTTCGAGGAAGCACTACAGATACTTCGAGGAAAAGATGCTGATATTTCTCAAGAGGCACAAGAAATTAAGGATTATATAGCTACGTTAGAACGCTTTCCAAAACCCAACCTGGTGGAATTGTTTCAGAGAAGATATCTGCGCTCCCTCACTATTGGAATAGGGCTTATGCTCTGCCAGCAATTAGGGGGGATCAACGGAGTTTGCTTTTATACGAGCAGTATTTTTGAGCTAGCAGGATTTTCTTCCGCCATAGGGTCTATAATATATGCTTGCCTTCAGGTTGTGATAACAGGTCTTGGTGCAGTAATGATAGATAAAGCTGGTAGGAAGCCTCTACTACTGGTCTCTGGATCAGGATTGGTGATGGGTTGTATATTTACAGCTGTTGCATTCTATCTTAAGGCTGAACAGGTGAGTGTGGGGGCCGTCCCTGCACTTGCTTTAACTGGCATACTGGTCTACATAGGATCATTTTCAATAGGAATGGGAGCGATTCCATGGGTTGTGATGTCTGAGATATTTCCTATCAACATTAAAGGGCAGGCAGGAAGCTTAGCCACATTGGTGAACTGGTTTGGTGCATGGTTATGTTCTTATACTTTCAATTTTTTGATGACCTGGAGCTCCTATGGCACCTTCATTCTTTATGCTGCAATCAACGCACTAGCCATATTATTTATAGTCGTAGTGGTGCCAGAAACCAAGGGGAAAAGTCTAGAACAATTACAAGCAGCCATTAATGCATAG 1362 0.4295 MAIKEPLIQEHKNNPWMVYFTTFVAVCGSYEFGACAGYSSPTQYAITQDLSLSLAEYSLFGSILTFGAMLGAITSGPVADFIGRKGSMRVSSAFCVAGWLVIYFSEGPVPLDIGRLATGYGMGVFSFVVPVFIAEIAPKDLRGALTTLNQFMIVAGVSVSYVIGTILSWRALALTGLIPAAVLLLGLFLIPESPRWLAKRGREKDFEEALQILRGKDADISQEAQEIKDYIATLERFPKPNLVELFQRRYLRSLTIGIGLMLCQQLGGINGVCFYTSSIFELAGFSSAIGSIIYACLQVVITGLGAVMIDKAGRKPLLLVSGSGLVMGCIFTAVAFYLKAEQVSVGAVPALALTGILVYIGSFSIGMGAIPWVVMSEIFPINIKGQAGSLATLVNWFGAWLCSYTFNFLMTWSSYGTFILYAAINALAILFIVVVVPETKGKSLEQLQAAINA* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1272 453 Gene3D MFS general substrate transporter like domains 10 452 IPR036259 -
Lan5g1272 453 PANTHER SUGAR TRANSPORTER ERD6-LIKE 7 14 452 - -
Lan5g1272 453 PRINTS Sugar transporter signature 112 131 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan5g1272 453 PRINTS Sugar transporter signature 264 274 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan5g1272 453 PRINTS Sugar transporter signature 353 374 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan5g1272 453 PRINTS Sugar transporter signature 376 388 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan5g1272 453 Pfam Sugar (and other) transporter 27 449 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lan5g1272 453 PANTHER - 14 452 - -
Lan5g1272 453 ProSiteProfiles Major facilitator superfamily (MFS) profile. 17 440 IPR020846 GO:0022857
Lan5g1272 453 ProSitePatterns Sugar transport proteins signature 1. 305 322 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lan5g1272 453 TIGRFAM SP: MFS transporter, sugar porter (SP) family 13 446 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan5g1272 453 ProSitePatterns Sugar transport proteins signature 1. 75 92 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lan5g1272 453 SUPERFAMILY MFS general substrate transporter 15 447 IPR036259 -
Lan5g1272 453 CDD MFS_GLUT6_8_Class3_like 19 446 IPR044775 GO:0008643|GO:0051119
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1272 Lan-Chr5 26363194 26366994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1272 9 452 Organic Solute Cotransporters AT5G18840 59.955 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1272 K03444 - gmx:100785248 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0558 9 8254454 8261227 Lan5g1272 5 26363194 26366994 LSH
Lan9g0555 9 8218525 8223030 Lan5g1272 5 26363194 26366994 LSH