Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0555 ATGACAATCAAAGGAGTCAGAGAGCCACTGATTGGGGAGCAGAAAGAAAGCAAAGGACATCCATGGATGGTTTACTTCACTACATTTGTTGCAGTTTGTGGTTCTTATGAATTTGGAGCTTGCGCTGGCTATTCATCTCCCACTCAATATGCTATCACTAATGATCTCAGTCTCTCTTTGAGAGAGTATTCTTTGTTCGGCTCCATCTTGACTTTTGGTGCGATGATTGGTGCAATAACAAGTGGACCTATTTCTGATTTTGTTGGACGAAAAGGGGCAATGAGAGTGTCGAGTGCTTTCTGTGCTATAGGATGGCTTGTTATTTATCTCTCTGAGGGTCCAGTAACTTTGGATACTGGGAGGCTAGCAACAGGATATGGAATGGGTGTTTTTTCTTATGTGGTTCCTGTCTTCATAGCAGAAATTGCACCAAAAGATCTCCGAGGTGCACTGACTACCTTAAATCAGTTCATGATCGTTGCTGGAGTGTCTGTGGCATACATAATTGGAACCATACTTTCATGGAGGACTTTAGCTTTAACTGGCCTCATCCCCGCTGCTGTATTGCTTTTGGGTCTGTTTTTAATTCCGGAGTCTCCTAGATGGCTAGCAAAGAGAGGACGCGAAAAAGATTTTGTGGCAGCACTGCAGATACTTCGTGGTATAGATGTTGATATATCTCAAGAGGCAAATGAAATTCAGGATTATATAACTACTTCAGACCGGCTTCCAAAATCCAACCTTCTAGAATTGTTTCAGAGAAGATATCTGCGCTCACTCACTATTGGAGTAGGGCTTATGCTCTGCCAGCAATTAGGAGGAATCAACGGAGTTGTCTTTTATACCAGCAGTATTTTTGACCTCGCAGGATTTCCTTCTACCACTGGGACTATACTATATGCTTGCCTTCAGGTTGTGATCACAGGTCTTGGTGCAGCATTGATAGATAAAGCTGGCAGGAAGCCCCTGTTACTGGTCTCTGGATCGGGTTTGGTCACTGGTTGTATACTTACAGCAGTTGCATTCTATCTTAAGGTTCAACAGGTGAGTATGGGGTCAGTTCCAGCACTTGCTTTAACTGGCATACTGGTCTACATAGGATCATTTTCAATTGGAATGGGAGCTATTCCATGGGTTGTGATGTCCGAGATATTTCCTATCAATATTAAAGGACAGGCAGGAAGCATAGCCACATTAGTGAACTGGTTTGGTGCATGGTTATGCTCTTATACTTTCAACTTTCTAATGAGCTGGAGCTCCTATGGTACCTTCATTCTTTATGCTGCAATCAACGTACTAGCCATATTATTTATAGTTGTGGCAGTGCCAGAAACCAAGGGGAAAAGCCTGGAACAATTACAAGCAGCCATTAGTGCATAG 1380 0.429 MTIKGVREPLIGEQKESKGHPWMVYFTTFVAVCGSYEFGACAGYSSPTQYAITNDLSLSLREYSLFGSILTFGAMIGAITSGPISDFVGRKGAMRVSSAFCAIGWLVIYLSEGPVTLDTGRLATGYGMGVFSYVVPVFIAEIAPKDLRGALTTLNQFMIVAGVSVAYIIGTILSWRTLALTGLIPAAVLLLGLFLIPESPRWLAKRGREKDFVAALQILRGIDVDISQEANEIQDYITTSDRLPKSNLLELFQRRYLRSLTIGVGLMLCQQLGGINGVVFYTSSIFDLAGFPSTTGTILYACLQVVITGLGAALIDKAGRKPLLLVSGSGLVTGCILTAVAFYLKVQQVSMGSVPALALTGILVYIGSFSIGMGAIPWVVMSEIFPINIKGQAGSIATLVNWFGAWLCSYTFNFLMSWSSYGTFILYAAINVLAILFIVVAVPETKGKSLEQLQAAISA* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0555 459 PRINTS Sugar transporter signature 118 137 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan9g0555 459 PRINTS Sugar transporter signature 270 280 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan9g0555 459 PRINTS Sugar transporter signature 359 380 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan9g0555 459 PRINTS Sugar transporter signature 382 394 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan9g0555 459 PANTHER - 20 458 - -
Lan9g0555 459 Gene3D MFS general substrate transporter like domains 17 458 IPR036259 -
Lan9g0555 459 Pfam Sugar (and other) transporter 33 455 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lan9g0555 459 SUPERFAMILY MFS general substrate transporter 26 453 IPR036259 -
Lan9g0555 459 ProSitePatterns Sugar transport proteins signature 1. 81 98 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lan9g0555 459 ProSitePatterns Sugar transport proteins signature 1. 311 328 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lan9g0555 459 TIGRFAM SP: MFS transporter, sugar porter (SP) family 22 452 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan9g0555 459 CDD MFS_GLUT6_8_Class3_like 25 452 IPR044775 GO:0008643|GO:0051119
Lan9g0555 459 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 446 IPR020846 GO:0022857
Lan9g0555 459 PANTHER SUGAR TRANSPORTER ERD6-LIKE 7 20 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0555 Lan-Chr9 8218525 8223030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0555 13 457 Organic Solute Cotransporters AT5G18840 60.268 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0555 K03444 - gmx:100819822 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0555 9 8218525 8223030 Lan5g1272 5 26363194 26366994 LSH