Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0558 ATGACAATCAAAGAGGATGTGGAACATGGTGTGCAGAAAGGAACCAAAGAGCCACTGATTAGGGAACATAAAAGCCAGCTGGTCCCTGCAAGCAAACGACATCCATGGATGGTTTACTTCACTACATTTGTTGCCGTTTGTGGTTCTTATGAATTTGGAGCTTGTGCTGGCTATTCATCTCCCACTCAAGATGCTATCACGGAGGATCTCAATCTTTCTTTAGCAGAGTATTCCTTGTTTGGTTCTATCTTGACAATTGGTGCGATGATAGGCGCAATAACAAGTGGGCCTGTTGCTGATTTTATTGGACGGAAAGGAGCAATGAGAGTGTCCAGTGCTTTCTGTGTTGCAGGGTGGTTTGTTATTTGTTTTTCCGAGGGTCCAGTGCCTTTGGACATTGGGAGGCTAGCAACAGGATATGGAATGGGAGTTTTTTCATTTGTGGTTCCTGTCTTCATAGCAGAAATTGCACCAAAAGATCTCCGAGGTGCACTGACTACCTTAAATCAGTTCATGATCACTGCTGGAGTGTCTGTGGCATACGTAATTGGAACAGTACTACCATGGAGGGCTTTAGCTTTAACAAGCCTCATTCCCACTTCTGTGTTGCTTTTTGGTCTGTTTTTTATTCCGGAGTCTCCTAGATGGCTAGCAAGGAGAGGACATGAAAAAGATTTTGAGGAAGCATTGCAGATACTTCGAGGCAAAGGTGCTGATATTTCTCAAGAGGCAGATGAAATTAAGGATTACATAACTACTTTAGAATTGCTCCCAAAACCCAAGCTGCTGGAATTGTTTCAGAGAAGATATCTGCGCTCACTCATTATTGGAATAGGGCTTATGTTCTGCCAGCAATTAGGAGGAATCAATGGGGTTTGCTTTTACACCAGCAGTATTTTTGAGCTAGCAGGATTTTCTACCACCGTCGGGACTATAATATATGCTTGCCTTCAGATTGTGATCACAGGTCTTAGTGTAGTCTTGATAGATAAAGCAGGCAGGAAACCCCTATTACTGGTGTCTGGATCGGGATTGGTTGCTGGTTGTATATTTATATCAGTTGCATTCTATCTTAAGGTTCAACAGGTGGATGTGGGGGGTGTGCCAGCACTTGCTTTAATTGGAATAATGGTCTACATAGGATCATTTTCAATAGGAATGGGAGCTATTCCATGGGTTGTGATGTCCGAGATATTTCCTATCAATATTAAAGGACAGGCAGGAAGCATAGCCACATTAGCGAACTGGTTTGGTGCATGGTTATGCTCTTATACTTTCAACTTTCTAATGAGCTGGAGCTCCTATGGTACCTTTATTCTTTATGCTGCAACCAATGCACTAGCCATATTATTTATAGTTGTAGCTGTGCCAGAAACAAAGGGGAAAAGCCTGGAAGAATTACAATCAACCATTAACGCATAG 1422 0.4248 MTIKEDVEHGVQKGTKEPLIREHKSQLVPASKRHPWMVYFTTFVAVCGSYEFGACAGYSSPTQDAITEDLNLSLAEYSLFGSILTIGAMIGAITSGPVADFIGRKGAMRVSSAFCVAGWFVICFSEGPVPLDIGRLATGYGMGVFSFVVPVFIAEIAPKDLRGALTTLNQFMITAGVSVAYVIGTVLPWRALALTSLIPTSVLLFGLFFIPESPRWLARRGHEKDFEEALQILRGKGADISQEADEIKDYITTLELLPKPKLLELFQRRYLRSLIIGIGLMFCQQLGGINGVCFYTSSIFELAGFSTTVGTIIYACLQIVITGLSVVLIDKAGRKPLLLVSGSGLVAGCIFISVAFYLKVQQVDVGGVPALALIGIMVYIGSFSIGMGAIPWVVMSEIFPINIKGQAGSIATLANWFGAWLCSYTFNFLMSWSSYGTFILYAATNALAILFIVVAVPETKGKSLEELQSTINA* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0558 473 ProSitePatterns Sugar transport proteins signature 1. 95 112 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lan9g0558 473 ProSitePatterns Sugar transport proteins signature 1. 325 342 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lan9g0558 473 Pfam Sugar (and other) transporter 49 468 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lan9g0558 473 PANTHER - 34 471 - -
Lan9g0558 473 PRINTS Sugar transporter signature 132 151 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan9g0558 473 PRINTS Sugar transporter signature 284 294 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan9g0558 473 PRINTS Sugar transporter signature 373 394 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan9g0558 473 PRINTS Sugar transporter signature 396 408 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan9g0558 473 SUPERFAMILY MFS general substrate transporter 29 467 IPR036259 -
Lan9g0558 473 PANTHER SUGAR TRANSPORTER ERD6-LIKE 7 34 471 - -
Lan9g0558 473 Gene3D MFS general substrate transporter like domains 30 472 IPR036259 -
Lan9g0558 473 TIGRFAM SP: MFS transporter, sugar porter (SP) family 22 466 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan9g0558 473 CDD MFS_GLUT6_8_Class3_like 39 466 IPR044775 GO:0008643|GO:0051119
Lan9g0558 473 ProSiteProfiles Major facilitator superfamily (MFS) profile. 37 460 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0558 Lan-Chr9 8254454 8261227 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0558 1 472 Organic Solute Cotransporters AT5G18840 56.785 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0558 K03444 - gmx:100819822 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0558 9 8254454 8261227 Lan5g1272 5 26363194 26366994 LSH