Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1236 ATGTCCAACAATAGTAAGGTGAAGGGCCTTCTTAAAGGCCTTAGATTCATTTCTCAGATATTTGAGACTGAGAAAGAACCAGAAATTGAGATTGGTCTTCCCACAGATGTAAAGCATGTAGCACATATTGGAGTTGATAATAATCACTATGATAATTCTTCTGTCACCTTGATGAATGGATTAGAATCTATTCCAAGATTGTCATCAGCATCTGTAGATCTCAATGAAGACATTCATAGCAAAAGATCTTACAATTCAGAAAGACAAGTAAATGAAGATTCAAGCAGAGGAGGTTCATCTAGGCATGTGGATTATGAAGGTAATGAGAGAGAGTTTTCAAGGTCTAGGAGACAATCAACAGGAAACATGAGAGAGTGTCAAGCTAAGGAAAAATCAGACAAACCAAGGCAACAAAAAAAGCCATCTAAACATCATTCAAAGGATTCATCATCCAATGTAACCAAATCCACAGAACATGTTGATTCTTTCCAACTCCAAGAAAATAATAGTAGTAATAATAATTTGCCTCCTAAAAAGTGTCGCTCTAAGCCGAACTCGAAAGATGGTTCGGTTGGTGGTAGATCGGACCCTTCCAAATCAAGAGCCCAAACAAAGGACCACAATGATGAATCTTCACATTATAGGAGCAAACATAAATCCTTTGAAAAAGATGCAAAAATTGAGACAGAATGTAATGAAAATATCTTCAGAAATTATCCAAATTAG 726 0.3609 MSNNSKVKGLLKGLRFISQIFETEKEPEIEIGLPTDVKHVAHIGVDNNHYDNSSVTLMNGLESIPRLSSASVDLNEDIHSKRSYNSERQVNEDSSRGGSSRHVDYEGNEREFSRSRRQSTGNMRECQAKEKSDKPRQQKKPSKHHSKDSSSNVTKSTEHVDSFQLQENNSSNNNLPPKKCRSKPNSKDGSVGGRSDPSKSRAQTKDHNDESSHYRSKHKSFEKDAKIETECNENIFRNYPN* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1236 241 MobiDBLite consensus disorder prediction 155 180 - -
Lan5g1236 241 ProSiteProfiles CRIB domain profile. 31 44 IPR000095 -
Lan5g1236 241 MobiDBLite consensus disorder prediction 199 231 - -
Lan5g1236 241 MobiDBLite consensus disorder prediction 83 241 - -
Lan5g1236 241 Pfam P21-Rho-binding domain 30 49 IPR000095 -
Lan5g1236 241 CDD CRIB 29 67 - -
Lan5g1236 241 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC7-LIKE ISOFORM X1 6 209 - -
Lan5g1236 241 MobiDBLite consensus disorder prediction 83 137 - -
Lan5g1236 241 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 6 209 IPR044510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1236 Lan-Chr5 26185878 26187062 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1236 - - lang:109348450 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1236 5 26185878 26187062 Lan11g1353 11 20514402 20516472 PCT
Lan5g1236 5 26185878 26187062 Lan20g1002 20 10747493 10749592 PCT
Lan11g1353 11 20514402 20516472 Lan5g1236 5 26185878 26187062 PCT
Lan20g1002 20 10747493 10749592 Lan5g1236 5 26185878 26187062 PCT