Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1353 ATGTCCAGTAGTAAGGTCAAAGGCCTTCTTAGAGGCCTTAGATACATATCTCAAATATTTGATAATGAAAAAGAAGAAGAAATACAGATTGGACTTCCCACAGATGTAAAGCATGTGGCTCATATAGGGTGGGATGGTCCCTCTGTAAATACTCCCAGCTGGATGAACGAATTTAAATCTTCTCCACAATTTGCATCAGCACCTCTAAATCTAAATGGAGAGAGTCAAAATATAGGACAAGATAATTCGGTAAAATGGGTCTCAGAAGATTCAAGGAGAAGTTCAAGGCAAGTGAACTCTAGGGGCTTACCCGAGTTGCCAAAAGGACCTAAAAGGTCATCCAACAACACGACAGATTCTCCCATTAGGGAAAGATCAAATAAACCAAGACAATCAAGGAAGACATCTAAACTAAAGGATTCTTCTGACGAATCCAACTCAACCGAACAAATTATACAAATGGAAACAGTCCAAGGGGATGGCTCACCGGCAAGGAACTTATCAGACATTCCCAAGAAGTCTCACAGAAAGAAATCAAAAGATAGTTCATGTGGCAGCGAATCATCAAAATTGAGATCAAAAGGCCAATCCATGGAGCCCGAGTCTCCATCAGGATTTGTATCCAAGTCTAAGAACAACCAAAGGCCCTTAGAAGAAAATGAACATTATCAAAGAGGAGTTAGTGAGATATCTTGA 696 0.4009 MSSSKVKGLLRGLRYISQIFDNEKEEEIQIGLPTDVKHVAHIGWDGPSVNTPSWMNEFKSSPQFASAPLNLNGESQNIGQDNSVKWVSEDSRRSSRQVNSRGLPELPKGPKRSSNNTTDSPIRERSNKPRQSRKTSKLKDSSDESNSTEQIIQMETVQGDGSPARNLSDIPKKSHRKKSKDSSCGSESSKLRSKGQSMEPESPSGFVSKSKNNQRPLEENEHYQRGVSEIS* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1353 231 CDD CRIB 28 61 - -
Lan11g1353 231 MobiDBLite consensus disorder prediction 188 213 - -
Lan11g1353 231 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 5 196 IPR044510 -
Lan11g1353 231 Pfam P21-Rho-binding domain 29 70 IPR000095 -
Lan11g1353 231 ProSiteProfiles CRIB domain profile. 30 43 IPR000095 -
Lan11g1353 231 MobiDBLite consensus disorder prediction 123 144 - -
Lan11g1353 231 Gene3D CRIB domain 23 64 IPR036936 -
Lan11g1353 231 SMART PBD_5 30 61 IPR000095 -
Lan11g1353 231 MobiDBLite consensus disorder prediction 65 85 - -
Lan11g1353 231 MobiDBLite consensus disorder prediction 145 163 - -
Lan11g1353 231 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC7-LIKE ISOFORM X1 5 196 - -
Lan11g1353 231 MobiDBLite consensus disorder prediction 65 231 - -
Lan11g1353 231 MobiDBLite consensus disorder prediction 214 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1353 Lan-Chr11 20514402 20516472 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1353 - - cam:101503176 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1353 11 20514402 20516472 Lan20g1002 20 10747493 10749592 LSH
Lan5g1236 5 26185878 26187062 Lan11g1353 11 20514402 20516472 PCT
Lan11g1353 11 20514402 20516472 Lan5g1236 5 26185878 26187062 PCT