Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1210 ATGGCTGAAATCGTGGTTGATTCCGATTTGGATGGTGAAATTACTGCTAATGTGGTTCAAGCCATTGAGACTCCAAAGAAGGTTCTGTCCTATAATCATTCCTCACATCCACCTCTAAATGAGAGGATTATATCATCCATGATCAGGAGGTCTACTGCTGCACACCCTTGGCATGACCTTGAAATAGGACCTGGAGCTCCACTGACCTTCAACTGTGTGATTGAGATTGCTAAAGGGAGCAAAGTGAAATATGAACTTGACAAAAAAACTGGACTTATCAAGGTCGACCGTGTACTTTACTCATCCGTTGTGTATCCTCAAAACTATGGGTTTATCCCACGTACTCTTTGTGAGGATAGTGATCCCCTTGATGTATTGGTTATCATGCAGGAGCCTGTTCTTCCAGGTTGCTTTCTTCGGGCCAAAGCTATTGGTCTCATGCCCATGATTGATCAGGGTGAGAAAGATGACAAAATAATTGCTGTCTGTGCTGATGATCCCGAGTATCGACATTACAACGATATTAAGGAGCTTCCTCCACACCGTTTAGCTGAAATTCGTCGTTTTTTTGAAGATTACAAGAAGAATGAGAACAAGGAAGTTGCAGTAGACGACTTTTTGCCTGCCTCAGCTGCTTTTGAAGCGGTCAAGCATTCCATGACCTTGTATGCGGACTATATCGTAGAGAGCTTGAGGCGTTAG 702 0.4345 MAEIVVDSDLDGEITANVVQAIETPKKVLSYNHSSHPPLNERIISSMIRRSTAAHPWHDLEIGPGAPLTFNCVIEIAKGSKVKYELDKKTGLIKVDRVLYSSVVYPQNYGFIPRTLCEDSDPLDVLVIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVDDFLPASAAFEAVKHSMTLYADYIVESLRR* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1210 233 SUPERFAMILY Inorganic pyrophosphatase 50 228 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan5g1210 233 CDD pyrophosphatase 69 220 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan5g1210 233 Hamap Inorganic pyrophosphatase [ppa]. 68 224 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan5g1210 233 Pfam Inorganic pyrophosphatase 72 223 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan5g1210 233 PANTHER BNAC07G03580D PROTEIN 39 232 - -
Lan5g1210 233 Gene3D Inorganic pyrophosphatase 51 229 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan5g1210 233 PANTHER INORGANIC PYROPHOSPHATASE 39 232 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan5g1210 233 ProSitePatterns Inorganic pyrophosphatase signature. 119 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1210 Lan-Chr5 26016971 26021598 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1210 K01507 - gmx:100784203 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1210 5 26016971 26021598 Lan19g0469 19 6657203 6663582 LSH
Lan5g1210 5 26016971 26021598 Lan11g1384 11 21300715 21304958 PCT
Lan11g1384 11 21300715 21304958 Lan5g1210 5 26016971 26021598 PCT