Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0469 ATGTCTGAAATCGTGGTTGATACCGAATTGGATGGAGAAATTGCAGCAAAAGTTGTTCGAAACAAGAGTGCAAATGTGGTTCCAGCCATTGAGACTGCAAACAAGGTTCCCACCTATGATTACTCCTCACACCCACCTCTAAATGAGAGGATTATATCATCTATGATCAGGAGGTCTACTGCTGCACATCCTTGGCATGACCTTGAGATAGGACCTGGAGCTCCACAGACCTTCAACTGTGTGATTGAAATTGCCAAAGGGAGCAAGGTGAAATATGAACTTGACAAAAAAACTGGACTTATCAAGGTCGATCGTGTACTTTACTCATCCGTTGTGTATCCCCACAACTATGGCTTTATCCCACGTACTATTTGTGAGGACAGTGATCCTCTTGATGTCCTGGTTATCATGCAGGAGCCAGTTCTTCCAGGTTGCTTTCTTCGGGCCAAAGCTATTGGTCTCATGCCCATGATTGATCAGGGTGAGAAAGATGACAAAATCATTGCAGTATGTGCTGATGATCCAGAGTATCGACATTACAATGATATCAAGGAGCTTCCTCCACATCGTTTAGCCGAAATTCGTCGATTTTTTGAAGATTACAAGAAGAATGAGAACAAGGAAGTTGCAGTCAACGACTTTTTGCCTGCCTCAACTGCTTTTGAAGCTATCAAGCACTCCATGACCCTTTATGCTGACTACATAGTGGAAAGCTTGAGGCGCTAG 726 0.4366 MSEIVVDTELDGEIAAKVVRNKSANVVPAIETANKVPTYDYSSHPPLNERIISSMIRRSTAAHPWHDLEIGPGAPQTFNCVIEIAKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPLDVLVIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASTAFEAIKHSMTLYADYIVESLRR* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0469 241 Hamap Inorganic pyrophosphatase [ppa]. 76 232 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan19g0469 241 Gene3D Inorganic pyrophosphatase 59 237 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan19g0469 241 PANTHER BNAC07G03580D PROTEIN 47 240 - -
Lan19g0469 241 SUPERFAMILY Inorganic pyrophosphatase 58 236 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan19g0469 241 ProSitePatterns Inorganic pyrophosphatase signature. 127 133 - -
Lan19g0469 241 PANTHER INORGANIC PYROPHOSPHATASE 47 240 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan19g0469 241 Pfam Inorganic pyrophosphatase 80 231 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan19g0469 241 CDD pyrophosphatase 76 228 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0469 Lan-Chr19 6657203 6663582 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0469 K01507 - gmx:100784203 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1210 5 26016971 26021598 Lan19g0469 19 6657203 6663582 LSH
Lan19g0469 19 6657203 6663582 Lan11g1384 11 21300715 21304958 PCT
Lan11g1384 11 21300715 21304958 Lan19g0469 19 6657203 6663582 PCT