Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1384 ATGTCTCCACCAATTGAAACCCCAGAGAAGTTTACCATCTCTCATAACACCTCACATCCACCACTTAATGAGAGGATTCTTTCATCCATGACTAGGAGATCTGTTGCTGCACACCCTTGGCATGATCTTGAGATAGGACCTGAAGCTCCAAAGATCTTCAATTGTGTGATTGAAATTGGTAAAGGAAGCAAAGTGAAATATGAACTTGATAAAAAAACTGGACTGATTATGGTCGACCGTGTACTTTACTCATCAGTTGTGTATCCTCACAACTATGGGTTTATCCCCCGTACTATTTGCGAGGACAGTGACCCCATTGATGTCTTGGTTATCATGCAGGAGCCAGTTCTTCCAGGTTGCTTTCTTCGGGCCAAAGCTATTGGACTCATGCCTATGATTGATCAGGGTGAGAAAGATGACAAGATAATTGCTGTCTGCGCTGATGATCCAGAGTACCGACATTATAATGACATAAAGGAGCTTCCACCACATCGTTTAGCTGAAATTCGTCGCTTTTTTGAAGATTATAAGAAGAATGAGAACAAGGAAGTTGCAGTAAATGACTTTCTTCCTGCCTCCTCTGCCTATGAAGCGATCCAGCACTCAATGACCCTGTATGCTGATTACGTTGTGGAGGGCTTGAGAAGATAG 651 0.4286 MSPPIETPEKFTISHNTSHPPLNERILSSMTRRSVAAHPWHDLEIGPEAPKIFNCVIEIGKGSKVKYELDKKTGLIMVDRVLYSSVVYPHNYGFIPRTICEDSDPIDVLVIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASSAYEAIQHSMTLYADYVVEGLRR* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1384 216 CDD pyrophosphatase 52 203 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan11g1384 216 Pfam Inorganic pyrophosphatase 55 206 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan11g1384 216 SUPERFAMILY Inorganic pyrophosphatase 31 210 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan11g1384 216 Hamap Inorganic pyrophosphatase [ppa]. 51 207 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan11g1384 216 Gene3D Inorganic pyrophosphatase 34 212 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan11g1384 216 PANTHER INORGANIC PYROPHOSPHATASE 22 216 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan11g1384 216 PANTHER BNAC07G03580D PROTEIN 22 216 - -
Lan11g1384 216 ProSitePatterns Inorganic pyrophosphatase signature. 102 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1384 Lan-Chr11 21300715 21304958 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1384 K01507 - pop:7454911 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1210 5 26016971 26021598 Lan11g1384 11 21300715 21304958 PCT
Lan19g0469 19 6657203 6663582 Lan11g1384 11 21300715 21304958 PCT
Lan11g1384 11 21300715 21304958 Lan5g1210 5 26016971 26021598 PCT
Lan11g1384 11 21300715 21304958 Lan19g0469 19 6657203 6663582 PCT